Burkholderia sp. FERM BP-3421: Bsp3421_006372
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Entry
Bsp3421_006372 CDS
T11127
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
burf Burkholderia sp. FERM BP-3421
Brite
KEGG Orthology (KO) [BR:
burf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
burf02000
]
Bsp3421_006372
Transporters [BR:
burf02000
]
Other transporters
Pores ion channels [TC:
1
]
Bsp3421_006372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON_like
DUF748
BON
Yop-YscD_ppl_2nd
FinO_N
Motif
Other DBs
NCBI-ProteinID:
WDD96174
LinkDB
All DBs
Position
1:complement(3472502..3473449)
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AA seq
315 aa
AA seq
DB search
MTKKRLPFRFAALRALPLALLAGGLCAGVAHADNLGPATVTPVDNSGITVKTTVLAPPSQ
AGAPALAGSAGQGAVVSTPAPANATPGQVVVGGKVPDEATKAAVLQRLRDTYGAANVVDQ
IEVGDVATPPNWTTNVQKLIGPQLKQISKGQLKIDGTQIDVKGEVHNEAQRQQLASDMAN
ALNPTYTIRNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQGKQILDQMAGALGKMTN
RTVEIIGHTDNSGNRTSNIALSQARADAVKGYLITKGIASQQLSTTGVGPDQPIASNDSN
DGRARNRRIEFRAGQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaagcgcctcccgttccgctttgccgcgctgcgtgcgctgccgctcgcgctc
ctcgccggcggcctctgcgccggcgtcgcgcacgccgacaatctcgggcccgcgaccgtc
acgccggtcgacaacagcggcatcacggtgaagacgaccgtgctcgcgccgccgtcgcag
gccggcgcgcccgcgctcgcgggcagcgccggacagggcgcggtggtctcgacgcccgcg
cccgcgaacgcgacgccgggccaggtggtggtgggcggcaaggtgcccgacgaggcgacc
aaggccgccgtgctgcagcggctgcgcgacacctacggcgcggcgaacgtggtcgaccag
atcgaggtcggcgacgtcgcgacgccgccgaactggacgacgaacgtgcagaagctgatc
ggcccgcaactgaagcagatcagcaaggggcagctgaagatcgacggcacgcagatcgac
gtgaagggcgaggtgcacaacgaggcgcagcgccagcagctcgctagcgacatggcgaac
gcgctgaacccgacctacacgatccgcaacgggctgcgcgtgagcgcgtccgagcagggc
ctgctcgaccagacgctcgcgaaccgcaccatcgagttcgagaccggcagcgcgaccctc
acgccgcagggcaagcagatcctcgaccagatggcgggcgcgctcggcaagatgacgaac
cgcaccgtcgagatcatcggccacaccgacaactcggggaaccggacctcgaacatcgcg
ctgagccaggcgcgcgccgatgcggtgaaggggtacctgatcacgaaggggatcgcgtcg
cagcagctgagcacgacgggcgtcgggccggatcagccgatcgcatcgaacgacagcaac
gacgggcgcgcgcgcaaccgccggatcgagttccgggcggggcagtaa
DBGET
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