Burkholderia sp. FERM BP-3421: Bsp3421_006426
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Entry
Bsp3421_006426 CDS
T11127
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
burf Burkholderia sp. FERM BP-3421
Pathway
burf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
burf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bsp3421_006426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
burf03400
]
Bsp3421_006426
Enzymes [BR:
burf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Bsp3421_006426
DNA repair and recombination proteins [BR:
burf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bsp3421_006426
Prokaryotic type
Bsp3421_006426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WDD96226
LinkDB
All DBs
Position
1:complement(3535623..3536390)
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AA seq
255 aa
AA seq
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MQQPSLFDSPAAATPTAASLAAQFDALPPAWHALLAPFIDSEAYAPLCRFVDHERAAGKT
IYPDDVFRALRLTSPDDVKVVILGQDPYHGDDRGTPQAHGLAFSVPPGVRPPPSLRNIFK
EIAANCGHEAPHHGCLDTWARQGVLLLNTVLTVEKAAAASHAKRGWEPCTDTLIRELARR
HRGLVFMLWGAHAQAKRALFDPHAHCVLEAPHPSPLSAHRGFLGCRHFALANDYLGAQGR
ALIDWRLPDQAATLA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaccgtcgctcttcgattcgcccgccgccgccacgccgacggccgcgtcgctc
gccgcccagttcgacgcgctgccgcccgcatggcacgcgctgctcgcgcccttcatcgac
agcgaagcctacgcgccgctgtgccgcttcgtggaccacgaacgcgccgccggcaagacg
atctatccggacgacgtgttccgcgcgctgcggctcacgagccccgacgacgtgaaggtc
gtgatcctcggccaggatccgtaccacggcgacgaccgcggcacgccgcaggcgcacggg
ctggcgttctcggtaccgcccggggtgcggccgccgccgtcgctgcgcaacatcttcaag
gaaatcgccgcgaactgcggccatgaagcgccgcaccacggttgcctcgacacctgggcg
cgccagggcgtgctgctgctcaacaccgtgctgacggtcgagaaggccgccgcggcgagc
cacgcgaagcgcggctgggagccgtgcaccgacacactgatccgcgaactcgcgcggcgt
catcgcgggctcgtgttcatgctgtggggcgcgcatgcccaggccaagcgcgcgctgttc
gatccgcacgcgcattgcgtgctcgaggcgccgcatccgtcgccgctgtccgcgcatcgc
ggcttcctgggctgccgccacttcgcgctcgcgaacgactatctgggcgcgcagggccgc
gcgctgatcgactggcggctgccggatcaggcggcgacgctcgcctga
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