Burkholderia sp. FERM BP-3421: Bsp3421_006686
Help
Entry
Bsp3421_006686 CDS
T11127
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
burf Burkholderia sp. FERM BP-3421
Pathway
burf00260
Glycine, serine and threonine metabolism
burf00460
Cyanoamino acid metabolism
burf00630
Glyoxylate and dicarboxylate metabolism
burf00670
One carbon pool by folate
burf00680
Methane metabolism
burf01100
Metabolic pathways
burf01110
Biosynthesis of secondary metabolites
burf01120
Microbial metabolism in diverse environments
burf01200
Carbon metabolism
burf01230
Biosynthesis of amino acids
burf01240
Biosynthesis of cofactors
burf04981
Folate transport and metabolism
Module
burf_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
burf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Bsp3421_006686
09102 Energy metabolism
00680 Methane metabolism
Bsp3421_006686
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bsp3421_006686
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Bsp3421_006686
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Bsp3421_006686
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Bsp3421_006686
Enzymes [BR:
burf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Bsp3421_006686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
WDD96473
LinkDB
All DBs
Position
1:3809043..3810290
Genome browser
AA seq
415 aa
AA seq
DB search
MFDRAQSTIANVDPEIWQAIQQENGRQEEHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRIKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNEGEDIDYAAAEQLAQEHKPKLIVAGASAFAL
KIDFERLAKIAKSVGAYFMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEYEKPINSAIFPGIQGGPLMHVIAAKAVAFKEAASPEFKAYQQRVVENARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKNITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGI
RLGSPAMTTRGFGPAEAETVGNLIADVLDNPEDAATLERVRTQVAELTRRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagcccaaagcaccatcgcgaacgtcgatcctgaaatctggcaggcgatc
cagcaggagaacggccgccaggaagaacacatcgagctgatcgcttccgagaactacacg
tcgccggccgtgatggccgcgcaggggtcgcagctgaccaacaagtacgccgaaggctac
ccgggcaagcgctactacggcggctgcgagtatgtcgacgtggtcgagcagctcgcgatc
gaccgcatcaagcagctgttcggcgcggaagcggcgaacgtgcagccgaattcgggctcg
caggcgaaccagggcgtgttcttcgccatgctgaagccgggcgacacgatcatggggatg
agcctcgcgcacggcggccacctcacgcacggctcgcccgtcaacatgtcgggcaagtgg
ttcaacgtggtcagctacggcctgaacgaaggcgaggacatcgactacgccgcggccgag
cagctcgcgcaggaacacaagccgaagctgatcgtcgcgggcgcgtccgcgttcgcgctg
aagatcgatttcgagcgcctcgcgaagatcgcgaaatcggtcggcgcgtacttcatggtc
gacatggcgcactacgcgggcctgatcgccgcgggcgtctatccgaacccggtgccgcac
gccgatttcgtcacgaccaccacccacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggccgagtacgagaagccgatcaactcggcgatcttcccgggcatccagggc
ggtccgctgatgcacgtgatcgcggccaaggcggtggcgttcaaggaagccgcttcgccg
gaattcaaggcctaccagcagcgggtggtcgagaacgcgcgcgtgctggcggagacgctc
gtcaagcgcggcctgcgcatcgtgtcgggccgcaccgagagccatgtgatgctggtcgac
ctgcgcgccaagaacatcacgggcaaggcggcggaagcggcgctcggcgcggcgcacatc
acggtcaacaagaacgcgatcccgaacgatccggaaaagccgttcgtgacctcgggcatc
cgcctcggttcgccggcgatgaccacgcgcggcttcggcccggcggaagccgagacggtc
ggcaacctgatcgccgacgtgctggacaacccggaagacgcggccacgctcgaacgcgtg
cggacgcaggtcgccgagctgacccgccgtttcccggtctatcgctga
DBGET
integrated database retrieval system