Burkholderia sp. JP2-270: DM992_00945
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Entry
DM992_00945 CDS
T07766
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
burk
Burkholderia sp. JP2-270
Brite
KEGG Orthology (KO) [BR:
burk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
burk03016
]
DM992_00945
Enzymes [BR:
burk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DM992_00945
Transfer RNA biogenesis [BR:
burk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DM992_00945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AWU98288
UniProt:
A0A2U9SL66
LinkDB
All DBs
Position
1:complement(210847..212934)
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AA seq
695 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFDKPAASELMQEADTA
AQQIDLDFLWECAPADEFAYTALAEEYFGAAYGPVERAALVLRLHGSPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQAQYEEELKAGKLPEAFAGKVLGLLTRPDKNAIEYKA
LEAAAGARGVSPARLMLDCGGIASPRALHEARFLAEFFPHGTGFPPVTVGALPDDLPRAN
VEAFSIDDITTTEIDDAFSVEHLSDGRVRIGVHIAAPALGIVRGDAVDAIARTRLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVNRETQDIVANETRAELVFVKSNLRHNT
LDELVNEETLAAGTGDYPHKDDIAVLWPLAQALFEKRQLARAGYGLKREVQRNTDYNFYV
EGEHVSITPRRRGSPLDLIVSELAILANSTWGAFLHDHTVPGIYRSQRGFGAPGPKRTRM
QTTAAPHEGLGVPQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYAV
VQGFDDTYTAYADYQRRMEYFWCLRWLAQEQKKQVVASVVKGDLVRLEEIPLLLHVPGLG
VHARGTRVLLDVMSLDELTIEASVRLLNVLDAPTVTSGDAAEEEDDAESGDDTLIDAEDA
TAETEAEALAEADGAAAGAGGEGASGNDGEQGRAS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcatttcaggtcgagttgcccggcgggcggcgcgcgaaggtgcgcgcgaaagac
gtgctgatcgaattcgacaagccggccgcgagcgaactgatgcaggaggccgacacggcc
gcgcagcagatcgatctggatttcctgtgggaatgcgcgccggccgacgagttcgcctat
acggcgctggccgaggagtacttcggcgcggcgtacggcccggtcgagcgcgcggcgctg
gtgctgcggctgcacggctcgcccgtctacttccgccgcaaggggcgcggccagtaccag
cgcgcgccggaagagcagctcaagatggcgctcgcgtcgctcgagcgcaagcgccagcag
gcgctcgtccaggcgcagtatgaagaggaactgaaggccggcaagctgccggaagcgttc
gcgggcaaggtgctcgggctgctgacgcggccggacaagaacgcgatcgaatacaaggcg
ctggaagcggcggccggcgcgcgcggcgtgtcgccggcgcggctgatgctcgactgcggc
ggcatcgcgtcgccgcgtgcgctgcacgaggcgcgcttcctcgcggaattcttcccgcac
ggcacgggctttccgcccgtcaccgtcggcgcgctgccggacgacctgccgcgcgcgaac
gtcgaggcgttctcgatcgacgacatcacgacgaccgaaatcgacgatgcgttctcggtc
gaacacctgtccgacggccgcgtgcggatcggcgtgcacatcgcggcgccggcgctcggc
atcgtgcgcggcgacgcggtcgacgcgatcgcgcgcacgcgcctgtcgaccgtctatatg
ccgggcgacaagatcacgatgctgccggacgacgtcgtcgacgtgtttacgctgaaggag
ggcgattaccgtccggcgctgtcgctgtacatcatcgtcaaccgcgaaacgcaggacatc
gtcgcgaacgagacgcgcgccgaactcgtgttcgtgaagagcaacctgcgtcacaacacg
ctcgacgagctcgtcaacgaagagacgctcgcggccggcaccggcgactatccgcacaag
gacgacatcgccgtgctgtggccgctcgcgcaggcgctgttcgagaagcgtcagctcgcg
cgcgcgggctatggcctgaagcgcgaagtgcagcgcaacaccgactacaacttctatgtc
gaaggcgagcacgtgtcgatcacgccgcgccgccgcggttcgccgctcgacctgatcgtg
tccgagctcgcgatcctcgcgaactcgacctggggcgcgttcctgcacgaccacacggtg
cccggcatctaccgctcgcagcgcggcttcggcgcaccgggcccgaagcgcacgcggatg
cagacgacggccgcgccgcacgaaggtctcggcgtgccgcagtacgcatggagcacgtcg
ccgctgcgccgctacgtcgacctcgtgaaccagtggcaattgctcgcatgcgtgcagcat
ggcgtcaccgccaagctcgccgcgccgttcaagccgaaggacgccgacctgtacgcggtc
gtgcagggcttcgacgacacctacaccgcgtacgccgactaccagcgccggatggaatat
ttctggtgcctgcgctggctcgcgcaggagcagaagaagcaggtcgtcgcgagcgtcgtg
aagggcgatctcgtgcgcctcgaggaaattccgctgctgctgcacgtgccggggctcggc
gtgcatgcgcgcggcacgcgcgtgctgctcgacgtgatgtcgctcgacgagctgacgatc
gaggcatcggtgcggctgctgaacgtgctcgacgcgccgaccgtgaccagcggcgacgcg
gccgaggaagaggatgacgccgaaagcggcgacgacacgctgatcgacgcggaagacgcc
acggcggaaaccgaggcggaagcgctggccgaagcggacggcgcggcggcaggtgcgggt
ggcgaaggcgcgagcggcaacgacggcgaacaggggcgcgcatcatga
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