KEGG   Burkholderia sp. JP2-270: DM992_01640
Entry
DM992_01640       CDS       T07766                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
burk  Burkholderia sp. JP2-270
Pathway
burk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:burk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DM992_01640 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:burk02044]
    DM992_01640 (icmF)
Secretion system [BR:burk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DM992_01640 (icmF)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF2207_C DUF8000 DUF2244
Other DBs
NCBI-ProteinID: AWU98406
LinkDB
Position
1:346950..350894
AA seq 1314 aa
MQRILNVLTHPRTLSIVGIVALAAILFIVADMLQLPLLWAAIAFAAILALWLVVALWRRW
RVKRANQQLGQVLEEQAETGKIAAPAAAALAPDAKTADLDVLRTRLSDAVKTIKTSKIGQ
VSGGSALYELPWYIVIGNPAAGKSSAVLNSGLQFPFADKNSAVIHGIGGTRNCDWFFTTE
GILLDTAGRYSVHEEDRSEWLGFLGLLKRYRPKAPINGIIVTASIAELTGNRPEFAINLA
KNLRQRVQELTEKLEVFAPVYVMFTKADLITGFTEFFSSSDKHEYDRVWGATLPYEPDDK
RDVVAQFDTHFEELYEGLKEISVAQLSLSRGNQLSPGQLSFPLEFSTIKPSLRAFLATLF
ENNPFQYKPIFRGFYFTSALQEGETNSAAAQRIAHRFGLDASALPKPHSAFSKNGFFLRD
LFSKVIFADRQTVRQFASPTKTRLRYATFFGFVAALALALGGWTWSTIGNQQLVSNVQAD
LDNVTRLQQGRNDLQSRLQAMDILEDRIEQLEQFRRDKPLSVSLGLYQGDRLEQHLLTEY
YNGVRQILLAPVSQNLASFMKDVNAHPEQLVPMTRPPESGAVQGGTMPVSTNPAGAAPQA
SAAPAASGTAPAAAPQQPAAPQGGLYSDASPTNVQDAYNALKTYLMLSDKRHVEQAHLTD
QLARFWRGWLETNRGNMPRDEMIKSAERMISFYLARVNDDDWPMIDANLALVDQTRENLR
RVVRGMPARQRVYEEIKARASTRFAPMTIARIVGDGNQGLVAGSYAIPGTFTREAWFDYV
QPAIRDAATKELQAKDWVLNTSTQDDLTLEGSPEQIQKTLVGMYKTEYAQHWQKFMQGIA
VQGFSSFGQAVDGMNRLGDPQDSPIRKILETAYDQTSWDNPSLANVAIKKAQTGVMNWVK
QLFSRSQAGQVAAANIDINGNPAEVPMGPVGQEFIGLARIVATHDGTSMLKGYMDSLSKV
RTRFNVIKNQGDPGPGARQLMQQTLDGNGSELAESLKLVDEQMLTGLTDSQRKSLRPLLV
RPLMQAFAVVIQPASAEVNKVWNAQVYQPFQNSLATKYPFAASAKVEAGAGEIAQVFGPD
GSIAKFVGTTLGPLAVRRGDTLAARTWGDMGIGLTPDFTNGFARWVAPLAGGAAGGAAAA
SEPQTVFQILPQPSTGTTEYTIAIDGQQLRYRNTPPQWTNFVWPNPQGSPGATLSATTFD
GRTVQLVNEPGRYGLEKLINSAQRKRRPDGTFDLTWVQGSVNVSVTMRIISTSQPTGGGG
DQPQQQSLRGLQLPSSVADASAGAAQNATQSGTGTPGAAPAIAAANATNAQGAQ
NT seq 3945 nt   +upstreamnt  +downstreamnt
atgcaacgcatcctcaacgtgctgactcatccgcgtacgctctcgatcgtcgggatcgtc
gcgctagcggccatcctcttcatcgttgccgacatgctgcagctgccgctcctgtgggcg
gcgatcgcctttgcggcgatcctcgcgctgtggctcgtcgtcgcgctgtggcgccgctgg
cgcgtgaagcgcgcgaaccagcagctcggccaggtgctggaagagcaggcggaaaccggc
aagatcgccgcacccgccgccgcagcgctcgcgcccgacgcgaagacggccgacctcgac
gtgctgcgcacgcgcctgtcggacgcggtgaagacgatcaagacgtcgaagatcggccag
gtctcgggcggctccgcgctgtacgaactgccgtggtacatcgtgatcggcaacccggcc
gcgggcaagagcagcgccgtgctcaattccggcctgcagttcccgttcgcggacaagaac
agcgccgtgatccacggcatcggcggtacgcgcaactgcgactggttcttcacgaccgaa
gggatcctgctcgacacggccggccgctattcggtgcacgaggaagaccgcagcgagtgg
ctcggcttcctcggcctgctcaagcgctatcgcccgaaggcgccgatcaacggcatcatc
gtcaccgcgagcatcgccgaactcaccggcaaccgccccgaattcgcgatcaacctcgcg
aaaaaccttcgccagcgcgttcaggagctgacggaaaagctcgaggtgttcgcgccggtc
tacgtgatgttcaccaaggccgacctgatcaccggcttcaccgaattcttcagcagcagc
gacaagcacgaatacgatcgcgtgtggggcgccacgctgccctacgagcccgacgacaag
cgcgacgtcgtcgcgcagttcgacacgcacttcgaggaactctacgaagggctgaaggag
atcagcgtcgcgcagctgtcgctgtcgcgcggcaaccagctgtcgccgggccagttgagc
ttcccgctcgaattctcgacgatcaagccgtcgctgcgcgcgttcctcgcgacgctgttc
gagaacaacccgttccagtacaagccgatcttccgcggcttctacttcaccagcgcgctg
caggaaggcgaaaccaacagcgcggccgcgcagcgcatcgcgcaccgcttcggcctcgac
gcgagcgcgctgccgaagccgcacagcgcgttctcgaagaacggcttcttcctgcgcgac
ctgttctcgaaggtgatcttcgcggaccgccagacggtgcgccagttcgccagcccgacc
aagacgcggctgcgctacgcgaccttcttcggcttcgtcgcggcgctcgcgctcgcgctc
ggcggctggacctggtcgacgatcggcaaccagcaactggtctcgaacgtgcaggccgac
ctcgacaacgtcacgcgcctgcagcagggccgcaacgacctgcagtcgcgcctgcaggcg
atggacatcctggaagaccggatcgagcagctcgagcagttccgccgcgacaagccgctg
tcggtgtcgctcggcctgtaccagggcgaccgtctcgagcagcacctgctgaccgagtac
tacaacggcgtgcgccagatcctgctggcccccgtgtcgcagaacctcgcgtcgttcatg
aaggacgtgaacgcgcaccccgaacagctcgtgccgatgacccgcccgcccgaatcgggt
gccgtgcagggcggcacgatgcccgtctcgacgaacccggcaggcgccgcaccgcaggcc
agtgccgcaccggccgcgtccggcaccgcgccggccgccgcgccgcaacagccggccgca
ccgcagggcggcctctacagcgacgcgtcgccgaccaacgtgcaggacgcgtacaacgcg
ctcaagacgtacctgatgctgtccgacaagcgccacgtcgagcaggcgcacctgaccgac
cagctcgcccgcttctggcgcggctggctcgagacgaatcgcggcaacatgccgcgtgac
gagatgatcaagagcgcggagcgcatgatctcgttctacctcgcccgcgtgaacgacgac
gactggccgatgatcgacgcgaacctcgcgctcgtcgaccagacccgcgagaacctgcgc
cgcgtggtgcgcgggatgccggcccgccagcgcgtctacgaggaaatcaaggcgcgcgca
tcgacccgcttcgcgccgatgaccatcgcgcgcatcgtcggcgacggcaaccaggggctg
gtggccggcagctacgcgattccgggcacgttcacgcgcgaagcgtggttcgactacgtg
cagccggcaatccgcgacgcggcgaccaaggaactgcaggcgaaggactgggtgctgaac
acgtcgacgcaggacgacctgacgctcgagggcagccccgagcagatccagaagacgctg
gtcggcatgtacaagaccgagtacgcgcagcactggcagaagttcatgcagggcatcgcg
gtgcagggcttcagcagcttcggccaggccgtcgacgggatgaaccgcctcggcgacccg
caggattcgccgatccgcaagatcctcgagaccgcgtacgaccagacgtcgtgggacaac
ccgtcgctcgcgaacgtggcgatcaagaaggcgcagacgggcgtcatgaactgggtcaag
caactgttctcgcgctcgcaggccggccaggtggcggccgccaacatcgacatcaacggc
aatccggccgaggtgccgatgggtccggtcggccaggagttcatcgggctcgcacggatc
gtcgcgacgcatgacggcacgtcgatgctcaagggctacatggattcgctgtcgaaggtc
cggacccgcttcaacgtgatcaagaaccagggcgacccgggccccggcgcgcgccagctg
atgcagcagacgctcgacggcaacggttcggaactcgccgagtcgctgaagctcgtcgac
gagcagatgctgacgggcctcaccgattcgcaacgcaagtcgctgcgcccgctgctcgtg
cggccgctgatgcaggcgttcgcggtcgtgatccagccggccagcgccgaagtcaacaag
gtgtggaacgcgcaggtctaccagccgttccagaactcgctcgcgacgaagtacccgttc
gcggccagtgcgaaggtcgaggccggcgccggcgagatcgcgcaggtgttcggtccggac
ggctcgatcgcgaagttcgtcggcacgacgctcgggccgctcgcggtgcgccgcggcgac
acgctcgccgcccgcacgtggggcgacatgggcatcgggctcacgccggacttcacgaac
ggcttcgcgcgctgggtcgcgccgctcgcgggcggggcggcaggcggcgcggccgcggcg
tccgagccgcagacggtgttccagatcctgccgcagccgagcacgggcacgacggaatac
acgatcgcgatcgacgggcagcaactgcgctaccgcaacacgccaccgcagtggaccaac
ttcgtgtggccgaacccgcagggttcgccgggcgcgacgctgtccgcgacgaccttcgac
ggccgcacggtgcagctcgtcaacgaaccgggccgctacggcctcgagaagctgatcaac
tcggcgcagcgcaagcgccgtccggacggcaccttcgacctgacgtgggtgcagggcagc
gtgaacgtgtcggtgacgatgcgcatcatcagcacgtcgcagccgacaggcggcggcggt
gaccagccgcagcagcagagcctgcgcggcctgcaactgccgtcgtcggtcgccgacgcg
agcgcgggcgccgcgcagaacgcgacccagtccggcacgggcacgccgggcgcagcgccg
gccatcgcggccgccaacgcaacgaatgcacagggggcgcaatga

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