Burkholderia sp. JP2-270: DM992_02415
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Entry
DM992_02415 CDS
T07766
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
burk
Burkholderia sp. JP2-270
Pathway
burk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
burk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM992_02415 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
burk03019
]
DM992_02415 (recQ)
03400 DNA repair and recombination proteins [BR:
burk03400
]
DM992_02415 (recQ)
Enzymes [BR:
burk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DM992_02415 (recQ)
Messenger RNA biogenesis [BR:
burk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DM992_02415 (recQ)
DNA repair and recombination proteins [BR:
burk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DM992_02415 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AWV01169
UniProt:
A0A2U9SUY0
LinkDB
All DBs
Position
1:complement(499310..501226)
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AA seq
638 aa
AA seq
DB search
MRHASRERVVKIAVILPPSSFSLMSRALEILDEVFGYSAFRGQQGEIVEHVAGGGDCLVL
MPTGGGKSLCYQIPALLRREAGQGAGIVVSPLIALMQDQVAALREVGVRAAYLNSTLSGA
EAAATERALREGEIDLLYVAPERLMTGRFLELLERAKIGLFAIDEAHCVSQWGHDFRPEY
IQLSVLHERFPSVPRIALTATADAITRDEIIHRLALDDARVFISSFDRPNIRYRIVEKDN
ARSQLLDFIRAEHTNADGTTDAGVVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFEVRQ
KHQEMFQREEGIVMCATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANA
WMAYGLGDVVQQRKMIDESDADDAHKRVQTSKLDALLGLCETISCRRVRLLNYFGEASQP
CGNCDTCLEPPDSWDATREAQMALSCVFRAQRSSGFNFGSSHLIEILRGGRTEKVLQRGH
DQLSTFGIGASLSEPEWRAIFRQLVAYGYLAVDHGGFGALMLTEAAKPVLKNEEKVTLRR
YVKPQRTRQSSSRSGTRVDPTAGMGTRERARWDALRAWRAETAKTDGVPAYVIFHDATLA
EIARNAPETIDDLRHIPGMGVRKLERFGDEIIDVVESA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
attcgccacgcgtcgcgcgagcgggttgttaaaattgcggtcatccttccgccgtcctcg
ttctcactcatgtcccgcgccctcgaaattctcgacgaagtctttggttattccgcattt
cgcggccagcagggcgagatcgtcgagcacgtcgccggcggcggcgattgcctcgtgctg
atgccgaccggcggcggcaagtcgctgtgctaccagatcccggcgctgctgcgccgcgag
gccgggcagggcgccggcatcgtcgtgtcgccgttgatcgcgctgatgcaggaccaggtc
gcagcgctgcgcgaagtcggcgtgcgcgcggcctacctgaattcgacgctgtcgggcgcc
gaagccgcggcgaccgagcgcgcgctgcgcgagggcgagatcgacctgctgtatgtcgcg
cctgaacggctgatgacggggcgtttcctcgagttgctcgagcgcgcgaagatcggcctg
ttcgcgatcgacgaagcgcactgcgtgtcgcaatgggggcacgatttccgcccggaatac
atccagctgtcggtgttgcacgagcggttcccgtcggtgccgcgcatcgcgctgaccgcc
acggccgatgcgatcacgcgcgacgagatcatccatcgtctcgcgctcgacgatgcgcgc
gtgttcatatcgagcttcgatcgcccgaacatccgctaccggatcgtcgaaaaggacaac
gcgcgttcgcaactgctcgacttcatccgcgcggaacacacgaatgccgacggcacgacc
gatgcgggcgtcgtctattgcctgtcgcgccgcaaggtcgaggaaacggccgagtggctg
aaggcgcagggcgtgcgcgcgctgccgtatcacgcggggatggagttcgaggtgcggcag
aagcaccaggaaatgttccagcgcgaggagggcatcgtgatgtgcgcgacgatcgcgttc
ggcatgggcatcgacaagcccgacgtgcgcttcgttgcgcacctggatctgccgaagagc
gtcgaaggctattaccaggaaaccggtcgcgcgggccgcgacgggatgcccgcgaatgca
tggatggcgtacggcctcggcgatgtcgtccagcagcgcaagatgatcgacgagtccgac
gcggacgacgcgcacaagcgtgtgcagacgtcgaagctcgacgcgttgctcgggctgtgc
gagacgatttcgtgccgccgcgtgcggctgctgaactacttcggcgaggcgagccagccg
tgcggcaactgcgacacgtgcctcgagccgcccgattcgtgggacgcgacgcgcgaggcg
cagatggcgctgtcgtgcgtgttccgcgcgcagcgttcgagcggcttcaatttcggttcg
agccacctgatcgaaatcctgcgcggcggacgcaccgagaaagtgttgcagcgcggccac
gatcagttgagcacgttcgggatcggcgcgtcgctgtccgaacccgagtggcgcgcgatt
ttccggcagctcgtcgcgtacggctacctggcggtcgatcatggcggcttcggcgcgctg
atgctgaccgaggctgcgaagcccgtgctgaagaacgaggagaaggtcacgctgcgccgc
tacgtaaagccgcagcgcacgcggcagtcgtcgagccgcagcggcacgcgcgtcgatccg
acggccggcatgggcacgcgagagcgcgcacgatgggatgcgctgcgcgcgtggcgcgcg
gaaaccgcaaagacggacggtgtgccggcctacgtgatcttccacgacgcgacgctcgcc
gaaatcgcgcgcaatgcgccggagacgatcgacgacctccgccatatccccggcatgggc
gtgcgcaagctcgagcgcttcggcgacgagatcatcgacgtcgtcgaatcggcctga
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