Burkholderia sp. JP2-270: DM992_04275
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Entry
DM992_04275 CDS
T07766
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
burk
Burkholderia sp. JP2-270
Pathway
burk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
burk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DM992_04275 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
burk03400
]
DM992_04275 (xth)
Enzymes [BR:
burk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DM992_04275 (xth)
DNA repair and recombination proteins [BR:
burk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DM992_04275 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AWU98856
LinkDB
All DBs
Position
1:899681..900454
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AA seq
257 aa
AA seq
DB search
MMRVITANLNGIRSAAKKGFFDWLGEQNADCVCVQEIKVSADDLPAEFVEPHGFRSYFHH
AEKKGYSGAGVYSRHEPDDVIIGFGSSEFDSEGRYVEARYGKLSVVSVYVPSGSSGEERQ
QAKYRFMDEFMPHLAQLKKKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEEREWLTK
LFDDVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKSTSIFKD
IKFSDHAPLTVDYDYKK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgagtgattaccgccaacctgaacggcatccgctccgccgcgaagaagggcttc
ttcgactggctcggcgaacagaatgccgattgcgtgtgcgtgcaggaaatcaaggtatcg
gccgacgacctgccggccgaattcgtcgagccgcacggcttcaggagctatttccaccac
gccgagaagaagggctacagcggcgcgggcgtgtacagccgccatgagcccgacgacgtg
atcatcggcttcggcagcagcgaattcgattccgaggggcgctacgtcgaggcgcgctac
ggcaagctgtcggtcgtgtcggtgtacgtgccgtccggctcgagcggcgaagagcgccag
caggcgaagtaccgcttcatggacgaattcatgccgcacctcgcccagctcaagaagaag
cgcgaagtgatcctgtgcggcgacgtgaacatcgtccacaaggaaatcgacatcaagaac
tggaagagcaaccagaagaactcgggctgcctgccggaagagcgcgagtggctcacgaag
ctgttcgacgatgtcgggtatgtcgacgtgttccgcacgctcgaccagcgccccgagcag
tacacgtggtggagcaaccgcggccaggcgtacgcgaagaacgtcgggtggcggatcgac
taccagatcgcgacgccgggcgtggccggcaccgcgaagagcacgtcgatcttcaaggac
atcaagttcagcgatcatgcgccgctgacggtggactacgactacaagaagtga
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