Burkholderia sp. JP2-270: DM992_08470
Help
Entry
DM992_08470 CDS
T07766
Name
(GenBank) ATP-dependent helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
burk
Burkholderia sp. JP2-270
Pathway
burk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
burk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM992_08470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
burk03019
]
DM992_08470
Enzymes [BR:
burk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DM992_08470
Messenger RNA biogenesis [BR:
burk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DM992_08470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
aq_1923
Motif
Other DBs
NCBI-ProteinID:
AWU99582
LinkDB
All DBs
Position
1:1776926..1778485
Genome browser
AA seq
519 aa
AA seq
DB search
MSAGPAGLTHDVPAAPFERNATMSDSVAKPVDATFDQFGLAADILKAIVEQGYTTPTPIQ
AQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRE
LADQVAANVHAYGKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTAN
LGQVQMLVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQ
TIEVARSNSTNANVTQIVYDVAEGDKQAAVVQLLRDRGLKQVIVFCNSKIGASRLARNLE
RDGVVASAIHGDKTQIERMQALDAFKRGEIEALVATDVAARGLDIVELPAVINFDLPFSA
EDYVHRIGRTGRAGATGDALSLCSPNERKQLADIEKLIKRPLEVQTLALDKPARHRQDDR
GGERGGDRNSERGGERGGRRERDEHRGASGRRSAGSERSGHHRRHEAPVDDFFLKPYEPS
AAAKQSDDAQPAQQPEKKGPKRQVAALLGGFGMPRKPSA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaggcccggctggcctgacgcacgatgtccccgccgcgccttttgagcgaaac
gccaccatgtccgattctgtcgccaagcccgtcgacgcaaccttcgaccaattcggcctt
gccgccgatatcctgaaagccattgtggagcagggctatacgacgccgacgccgatccag
gcgcaggccattccggtcgtgctcgccggccgcgacgtcatgggcgccgcgcaaacaggc
accggcaagaccgcgagtttctcgctgccgatcatccagcgcctgctgccgcaggccaac
acgagcgcatcgcccgcgcgccacccggtgcgcgcgctgattctgacgccgacccgcgaa
ctggccgaccaggtcgccgcgaacgtgcatgcgtacgggaagcacacgccgctgcgcagc
gcggtcgtgttcggcggcgtcgacatgaacccgcagatggccgagttgcgccgcggcgtc
gagatcctgatcgcgacgccgggccgcctgctcgaccacgtgcagcagaagaccgcgaac
ctcgggcaggtgcagatgctcgtgctcgacgaggccgaccggatgctcgacatgggcttc
ctgccggacctgcagcggatcctgaacctgctgccgaaggagcgccagacgctgctgttc
tcggccaccttctcgccggaaatcaagaagcttgcgtcgacctacctgcgcaacccgcag
acgatcgaggtcgcgcgcagcaattcgacgaacgcgaacgtcacgcagatcgtttacgac
gtcgccgaaggcgacaagcaggcggccgtcgtgcagttgctgcgcgatcgcgggctcaag
caggtgatcgtgttctgcaacagcaagatcggcgcgagccggctcgcgcgcaatctcgag
cgcgatggcgtggtcgcgtcggcgatccacggcgacaagacgcagatcgagcggatgcag
gcgctcgacgcgttcaagcgcggcgaaatcgaggcgctggtcgcgaccgacgtggccgcg
cgcggcctcgacatcgtcgagctgccggccgtgatcaacttcgacctgccgttcagcgcg
gaagactacgtgcaccggatcggccgtacgggccgtgcgggcgcgaccggcgacgcgctg
tcgctgtgcagcccgaacgagcgcaagcagctcgccgatatcgagaagctgatcaagcgt
ccgctcgaagtgcagacgctcgcgctcgacaagccggcgcgccatcgtcaagacgaccgt
ggcggcgagcgcggcggcgaccgcaacagcgagcgcggtggcgaacggggcggtcgtcgc
gaacgcgacgagcatcgcggtgcatcggggcgccgctcggccggttccgagcgcagtggc
catcaccgtcgccacgaagcgccggtcgacgatttcttcctgaagccgtatgagccttcg
gcggcggcgaagcagtcggacgacgcgcagcctgcgcagcagcccgagaagaaagggccg
aagcgacaggtcgctgcgctgctcggcgggttcgggatgccgcgcaagccgtcggcgtaa
DBGET
integrated database retrieval system
