Burkholderia sp. JP2-270: DM992_08485
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Entry
DM992_08485 CDS
T07766
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
burk
Burkholderia sp. JP2-270
Pathway
burk03030
DNA replication
burk03430
Mismatch repair
burk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
burk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DM992_08485
03430 Mismatch repair
DM992_08485
03440 Homologous recombination
DM992_08485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
burk03032
]
DM992_08485
03400 DNA repair and recombination proteins [BR:
burk03400
]
DM992_08485
Enzymes [BR:
burk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DM992_08485
DNA replication proteins [BR:
burk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DM992_08485
DNA repair and recombination proteins [BR:
burk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DM992_08485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
AWU99585
UniProt:
A0A2U9SIF6
LinkDB
All DBs
Position
1:1780762..1784295
Genome browser
AA seq
1177 aa
AA seq
DB search
MSDPRFVHLRVHSEFSIADGIVRLDDIVKAAAADGQGALALTDLGNAFGLVRFYQEARGK
GIKPIAGCDVWIMNPDDRDKPSRLLLLVKDKVGYLNLCELLSKAWLTNQYRGRAELDASW
LDGELAQGLLALSGAQQGDIGLALAAGNEEAARRHAERWAKVFPGGFYIELQRYGQPGAE
AYIQQAATLAASLKLPVVATHPTQFMTDDDFTAHEARVCISEGDILANPRRQKRFTTDQY
FRTQDDMAALFADLPSAVANTVEIAKRCNLKLELGKPKLPLFPTPDGMSLDDYLVQLSKE
GLETRLVQLYPAEAERDAQRDTYYKRLEFECGTITKMGFPGYFLIVADFINWAKNNGVPV
GPGRGSGAGSLVAYALGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYV
KEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGVAKLIPFKPGKHVTIADAMK
EEPQLQERYDHEDEVHQLLDLAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDDGG
VVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKADWSLAQVPLDDPASFQ
ILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVSLYRPGPMDLIPSFCARKHGREK
VDYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAKHRE
IFAEGAAKNGLTREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAA
NMTLAMDDTDKVKILFDDCVVNNLVVLPPDINQSHYRFEPVAEADGKRSRTIRYGLGAVK
GSGQNAIEEILRAREEKAFTDLFDFCERIDRRVVNRRTVEALIRAGAFDSLNANRAQMLA
SVPLAMEAADQAEANAMQAGLFDMGAESPHAHALVDEPAWDDKRRLQEEKGALGFYLSGH
LFDAYRDEVRRFVRQKVGDLKEGRDKLVAGIIASLRTQMTQRGKMLIALLDDGSGQCEIT
IFNEQFEANKALFKEDELLIVQGQARNDAFTGGIRFTTDTVMDLERARSRYAQAVRLTMN
GNADAAALRRVLEPHVSKDDPAAAHAVEAPAPRGGGRDGGRRPQAPLPNGLAVQIHYSNA
RAQGEMRLGDAWRVKPSDMLLAELRAAFDGSVVEITY
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatccccgcttcgttcatcttcgcgttcactccgaattctcgattgccgacggc
atcgtgcgtctcgacgacatcgtcaaggcggcggccgcagacggccagggcgcgctcgcg
ctcaccgatctcggcaacgcattcggcctcgtccgtttctaccaggaagcccgcggcaag
ggcatcaagccgatcgccggctgcgacgtctggatcatgaatccggacgatcgcgacaag
ccgtcgcggctgctgctgctggtgaaggacaaggtcggctacctgaatctttgcgagctg
ctgtcgaaggcatggctcacgaaccagtatcgcggccgcgcggaactcgacgcgagctgg
ctcgacggcgagctcgcgcaggggctgctcgcgctgtcgggcgcgcagcagggcgatatc
gggctcgcgctcgcggccggcaacgaagaagctgcgcgccgtcacgccgaacgctgggcg
aaggtgtttccgggcggcttctacatcgagctgcagcggtacggccagccgggcgccgag
gcgtacatccagcaggccgcgacgctcgccgcgtcgctgaagctgccggtcgtcgcgacg
cacccgacgcaattcatgaccgacgacgatttcaccgcgcacgaggcgcgcgtgtgcatt
tcggaaggcgacatcctcgcgaacccgcgacgccagaaacgcttcacgaccgaccagtat
tttcgcacgcaggacgatatggccgcgctgttcgccgacctgccgtcggcggtcgcgaac
acggtcgagatcgcgaaacgctgcaacctgaagctcgagctcggcaagccgaagctgccg
ctgttcccgacgccggacggcatgtcgctcgacgactacctggtccagctgtcgaaggaa
gggctcgagacacggctcgtgcagctctatccggccgaagccgaacgcgacgcgcagcgc
gacacgtattacaagcgcctcgaattcgagtgcgggaccatcacgaagatgggctttccc
ggctacttcctgatcgtcgcggacttcatcaactgggcgaagaacaacggcgtgccggtc
ggcccgggccgcggctccggcgccggctcgctggtcgcgtacgcgctcggcattaccgac
ctcgacccgctgcgctacaacctgctgttcgagcgcttcctgaacccggaacgcgtgtcg
atgcccgacttcgacatcgacttctgccagcacggccgcgaccgcgtgatccagtacgtg
aaggagaagtacggcgcggacgccgtgtcgcagatcgccaccttcggcacgatggctgcg
aaggcggccgtgcgcgatatcggccgcgtgctcgacctcggctacatgttcaccgacggc
gttgcgaagctgatcccgttcaagccgggcaagcacgtgacgatcgccgatgcgatgaag
gaagagccgcagttgcaggagcgctacgaccacgaggacgaagtccaccagctgctcgat
ctcgcgcagcgcgtcgagggcctcacgcgtaacgtcgggatgcacgcgggcggcgtgctg
atcgcgcccggcaagctgaccgatttctgcccgctgtacacgcagggcgacgatggcggc
gtcgtcagccagtacgacaaggacgacgtcgaagccgtcggcctcgtgaaattcgacttt
ctgggcctcacgacgctgacgatcctcgactgggccgagcgctacattcgccgcctcgat
ccgtcgaaggccgactggtcgctcgcgcaggtgccgctcgacgatccggcgtctttccag
atcctgaagaaggccaacacggtcgcggtgttccagctggaaagccgcgggatgcagggc
atgctgaaggatgcgcagcccgaccgcttcgaggacatcatcgcgctggtgtcgttgtac
cgtccgggcccgatggacctgatcccgagcttctgcgcacggaagcacggccgcgagaag
gtcgactatccggatccgcgcgtcgaacccgtcctgaaagagacctacggcatcatggtc
tatcaggagcaggtgatgcagatggcgcagatcatcggcggctactcgctcggcggcgcg
gacttgctgcgtcgtgcgatgggcaagaagaagcccgaggagatggccaagcaccgcgag
atcttcgccgagggtgcggcgaagaacggcctcacgcgcgagaagtccgacgagatcttc
gacctgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggccgcgtatgca
ctgctcgcgtattacaccgcgtggctgaaggcgcaccatccggccgaattcatggcggcc
aacatgacgctcgcgatggacgacaccgacaaggtgaagatcctgttcgacgactgcgtc
gtgaacaacctcgtcgtgttgccgcccgacatcaaccagtcgcattaccggttcgagccc
gtcgccgaagccgacggcaagcgctcgcgcacgatccgctacggcctcggcgcggtgaag
ggcagcggccagaacgcgatcgaggaaatcctgcgcgctcgcgaggaaaaggcgttcacc
gacctgttcgatttctgcgaacggatcgaccggcgcgtcgtcaaccgccgcacggtcgag
gcgctgatccgcgccggcgcgttcgattcgctgaacgcgaaccgcgcgcagatgctcgcg
tcggtgccgctcgcgatggaagcggccgaccaggccgaggcgaacgcgatgcaggccggg
ctgttcgacatgggcgccgagtcgccgcacgcgcatgcgctcgtcgatgaaccggcgtgg
gacgacaagcgtcgcctgcaggaagaaaagggcgcgctcggcttctacctgtccggccac
ctgttcgacgcgtatcgcgacgaggtgcgccgcttcgtgcggcaaaaggtcggcgacctg
aaggaagggcgcgacaagctcgtcgcgggcatcatcgcatcgctgcgcacgcagatgacc
cagcgcggcaagatgctgattgcgttgctcgacgacggttcgggccagtgcgagatcacg
atcttcaacgagcagttcgaggcgaacaaggcgctgttcaaggaagacgaactgctgatc
gtgcaggggcaggcgcgcaacgacgcattcacgggcggcatccgctttacgaccgatacc
gtgatggatctcgaacgcgcgcgcagccgctatgcgcaggccgtgcggctgacgatgaac
ggcaacgccgacgcagccgcgctgcgccgcgtgctcgagccgcacgtgtcgaaggacgat
ccggccgccgcgcacgcggtcgaagcgcctgcaccgcgcggcggcgggcgtgacggcggt
cgtcgcccgcaggcgccgttgccgaacggcctcgcggtccagatccactacagcaacgcg
cgggcgcaaggcgaaatgcgtctgggcgacgcgtggcgcgtgaagccgagcgacatgctg
ctcgcggaactgcgcgcggcgttcgacggcagtgtcgtcgaaatcacgtactga
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