Burkholderia sp. JP2-270: DM992_08790
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Entry
DM992_08790 CDS
T07766
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
burk
Burkholderia sp. JP2-270
Pathway
burk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
burk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM992_08790 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
burk03019
]
DM992_08790 (pnp)
03016 Transfer RNA biogenesis [BR:
burk03016
]
DM992_08790 (pnp)
Enzymes [BR:
burk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DM992_08790 (pnp)
Messenger RNA biogenesis [BR:
burk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DM992_08790 (pnp)
Transfer RNA biogenesis [BR:
burk03016
]
Prokaryotic type
tRNA degradation factors
DM992_08790 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AWU99643
UniProt:
A0A2U9SLF8
LinkDB
All DBs
Position
1:1844222..1846369
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AA seq
715 aa
AA seq
DB search
MSMFNKVVKEFQWGQHKVRLETGEVARQASGAVIVDVEDTVVLATVVGAKSAKPGQDFFP
LTVDYLEKTYSAGKIPGGFFRREGRPSEHETLTSRLIDRPLRPLFPEGFYNEVQVVIHVL
SVNPEIPADIPALIGASAALAVSGLPFNGPVGAARVAYIDNAYVLNPTRDQIKASSLDLV
VAGTERAVLMVESEADQLSEDVMLGAVVFGHEQMQVAIDAIHELVREGGKPEWDWQPAPK
NEALIARVTELAQNDLLAAYQLRDKQARSTKLKEVYSATSAKLEEDALAAGTVAADKATV
GNVLFDIEARIVRSQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVV
ATLGTKGDEQIIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVK
CLPSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGN
KFAVLTDILGDEDHLGDMDFKVAGTEQGVTALQMDIKIQGITKEIMQVALAQAKEGRMHI
LGKMTSAVSGANTQLSEFAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDG
VVTIASTNSDGMAEAKKRIENITAEIEVGQVYEGTVLKLLDFGAIVNLLPGKDGLLHISE
IVNERVKDINDYLKEGQQVKVKVIQTDEKGRVRLSAKALLNEAAAAAQSDTPPQQ
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgttcaacaaggtcgtgaaggaattccagtggggccagcacaaggtgcgcctc
gaaaccggtgaagtcgctcgccaggcaagcggcgccgtgatcgtcgacgtcgaagacacc
gtcgtgctggcaaccgtcgtcggcgcgaagtcggcgaagccgggtcaggatttcttcccg
ctgaccgtcgactacctcgaaaagacctactcggccggcaagatcccgggcggcttcttc
cgccgcgaaggccgtccgtcggagcacgagacgctgacgtcgcgcctgatcgaccgtccg
ctgcgcccgctgtttccggaaggcttctacaacgaagtccaggttgtgatccacgtgctg
tccgtgaacccggaaatcccggcggacatccccgcgctgatcggcgcatcggctgcgctc
gccgtgtcgggcctgccgttcaacggcccggtcggtgctgcgcgcgtcgcatacatcgac
aacgcctacgtgctgaacccgacgcgcgaccagatcaaggcgtcgagcctcgacctcgtc
gttgcgggtacggaacgcgcggtgctgatggtcgaatcggaagctgaccaactgtcggaa
gacgtgatgctgggcgccgtggtgttcggccacgagcagatgcaagtggcgatcgacgcg
atccacgaactggtgcgcgaaggcggcaagcccgagtgggactggcagccggcgccgaag
aacgaggcgctgatcgcgcgcgtgaccgagctggcgcagaacgacctgctcgccgcttac
cagctccgcgacaagcaggctcgctcgacgaagctgaaggaagtctattcggcgacttcg
gcgaagctcgaggaagacgcgctggcggccggcacggttgctgccgacaaggccaccgtc
ggcaacgtcctgttcgacatcgaggcaaggatcgtccgttcgcagatcctgaacggcgag
ccgcgcatcgacggccgcgacacgcgcaccgtgcgcccgatcgagatccgtaccggcgtg
ctgccgcgcacccacggctcggcgctgttcacgcgcggcgagacgcaggcgctggtcgtc
gcgacgctcggcacgaagggtgacgagcagatcatcgacgcgctcgaaggcgagtaccgc
gagcgcttcatgctccactacaacatgcccccgttcgcgaccggcgaaacgggccgcgtc
ggctcgccgaagcgccgtgaaatcggtcacggccgcctcgcgaagcgcgcgctggtcaag
tgcctgccgagcgccgacgaattcggctactcgatccgcgtcgtgtcggaaatcaccgaa
tcgaacggttcgtcgtcgatggcatcggtgtgcggcggctgcctcgcgctgatggacgcc
ggcgtgccgatgaaggcgcacgtcgcgggcatcgcgatgggcctgatcctcgaaggcaac
aagttcgcggtgctgaccgacatcctcggcgacgaagatcacctcggcgacatggacttc
aaggtggccggcacggagcaaggcgtgacggcgctgcagatggacatcaagatccagggc
atcacgaaggaaatcatgcaggtcgcgctcgcgcaggcgaaggaaggccgcatgcacatc
ctcggcaagatgacgtcggcggtctcgggtgcgaacacgcagctgtcggaattcgcgccg
cgcatgatcacgatcaagatcaacccggaaaagatccgcgacgtgatcggcaagggcggt
tcggtgatccgcgcgctgacggaagaaacgggcacgaccatcgacatctcggacgacggc
gtcgtgacgatcgcgagcacgaacagcgacggcatggccgaagcgaagaagcgcatcgag
aacattacggcagagatcgaagtcggccaggtctacgaaggcacggtgctgaagctgctc
gatttcggcgcgatcgtgaacctgctgccgggcaaggacggcctgctgcacatctcggaa
atcgtcaacgagcgtgtgaaggacatcaacgactacctgaaggaaggccagcaggtcaag
gtcaaggtgatccagacggacgaaaagggtcgcgtgcgtctgtcggcaaaggcgctgctg
aatgaagcagcggcggcggcgcagtcggacacgccgccgcagcagtaa
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