Burkholderia sp. JP2-270: DM992_09050
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Entry
DM992_09050 CDS
T07766
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
burk
Burkholderia sp. JP2-270
Pathway
burk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
burk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DM992_09050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
burk03400
]
DM992_09050
DNA repair and recombination proteins [BR:
burk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DM992_09050
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DM992_09050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
UB2H
Kinesin
DALR_1
FlaG
Phage_T4_Y10B
Motif
Other DBs
NCBI-ProteinID:
AWU99684
LinkDB
All DBs
Position
1:1891295..1893385
Genome browser
AA seq
696 aa
AA seq
DB search
MSEHHAEAGDALDESKFVTFEGSPFQLYQPYPPAGDQPTAIDTLVEGIGDGLAFQTLLGV
TGSGKTFTMANTIARLGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPEA
YVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMILT
LRTGDKLGQRDVIARLIAMQYTRNEQDFQRGTFRVRGDTIDIFPAEHAEMAVRVELFDDE
VETLHLFDPLTGRVRQKIPRFTVYPSSHYVTPRDTVMRAVETIKDELRERLEFFHRDGKL
VEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPPDALMLLDES
HVLIGQLNGMYNGDRARKENLVNYGFRLPSALDNRPLKFPEFERKMRQVVFVSATPADYE
KRVTGQIAEQVVRPTGLVDPEIEVRPASSQVDDVLTEINARVKAGERVLITVLTKRMAEQ
LTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAIL
DADKEGFLRAERSLIQTIGRAARNVNGKAILYADTMTESMKRAIGETERRRAKQIAHNEK
MGITPRGVVKRIKDIIDGVYNADEARAELKEAQQRAKFEDMSEKQLAKEIKRLEKQMADY
AKNLEFEKAAATRDQLALLRERVFGANVGDHVSGGR
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacatcatgccgaagccggcgacgcgctcgacgaatccaaattcgtcaccttc
gaagggtcgccgttccagctgtatcaaccgtatccgcccgcaggcgaccagccgaccgcg
atcgacacgctcgtcgaaggcatcggcgacggccttgccttccagacgctgctcggtgtg
acgggttcgggcaagaccttcacgatggcaaacacgatcgcgcggctcggccgcccggcg
atcgtgtttgctccgaacaagacgctcgcggcacagctctatgccgagttccgcgagttc
tttccgcgcaacgcggtcgagtacttcgtttcgtactacgactactaccagcctgaggcc
tacgtgccccagcgcgacctgttcatcgagaaggattcgtcgatcaacgagcacatcgag
cagatgcggctgtcggcgacgaagagcctgatggagcgccgtgacgtggtgatcgtcgcg
acggtgtcggcgatctacggtatcggcaacccgtccgaataccaccagatgatcctgacg
ctgcgcaccggcgacaagctcggccagcgcgacgtgatcgcgcggctgatcgcaatgcaa
tacacgcgcaacgagcaggatttccagcgcggcacattccgcgtgcgtggcgacacgatc
gacatcttcccggccgaacacgcggaaatggccgtgcgcgtcgagctgttcgacgacgag
gtcgagacgctgcatctgttcgacccgctgaccgggcgcgtgcggcagaagattccgcgc
ttcaccgtgtatccgtcgtcgcactacgtgacgccgcgcgacaccgtgatgcgtgcggtc
gagacgatcaaggacgaattgcgcgaacgcctcgaattcttccaccgcgacggcaagctc
gtcgaggcgcagcggctcgagcagcgcacgcgcttcgatctcgagatgctgcaggaactc
ggcttctgcaagggcatcgagaactactcgcggcatttctcgggcgcggcgcccggcgag
ccgccgccgacgctcgtcgactacctgccgcccgatgcgctgatgctgctcgacgaatcg
cacgtgctgatcggccagttgaacggcatgtacaacggcgaccgcgcgcgcaaggaaaac
ctcgtcaattacgggtttcgcctgccgtcggcgctagacaaccggccgctcaagtttccc
gagttcgaacgcaagatgcgccaggtcgtgttcgtgtcggccacgccggccgactatgag
aagcgcgtgacggggcagatcgccgaacaggtcgtgcggccgacggggctcgtcgatccg
gaaatcgaagtgcggccggcgagctcgcaggtcgacgacgtgctgaccgagatcaacgcg
cgggtgaaggccggcgagcgcgtgctgatcaccgtgctgacgaagcgcatggccgaacag
ctcaccgagtttctggccgaccatggcgtcaaggtgcgctacctgcacagcgacatcgac
acggtcgagcgtgtcgagatcatccgcgacctgcggctcggcacgttcgacgtgctggtc
gggatcaacctgttgcgcgaggggctggacattcccgaagtgtcgctcgtcgcgatcctc
gatgcggacaaggagggcttcctgcgcgccgaacgctcgctgatccagacgatcggccgc
gccgcgcggaacgtgaacggcaaggcgattctctatgccgacacgatgaccgagtcgatg
aagcgcgcgatcggcgaaaccgagcggcgccgcgcgaagcagatcgcgcacaacgagaaa
atgggcatcacgccgcgcggcgtcgtgaagcgcatcaaggacatcatcgacggcgtctac
aacgcggacgaggcgcgcgcggagctgaaggaagcgcagcaacgcgcgaaattcgaggac
atgtcggaaaagcagctcgcgaaggaaatcaagcgtctcgagaagcagatggccgactac
gcgaagaacctcgagttcgagaaggccgctgcgacccgcgaccagcttgcgctgctgcgc
gagcgcgtgttcggcgcgaacgtcggcgaccacgtcagcggcggccggtaa
DBGET
integrated database retrieval system
