Burkholderia sp. JP2-270: DM992_15485
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Entry
DM992_15485 CDS
T07766
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
burk
Burkholderia sp. JP2-270
Pathway
burk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
burk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DM992_15485 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
burk03400
]
DM992_15485 (recB)
Enzymes [BR:
burk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DM992_15485 (recB)
DNA repair and recombination proteins [BR:
burk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DM992_15485 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
TMP_N
DUF374
Motif
Other DBs
NCBI-ProteinID:
AWV00755
LinkDB
All DBs
Position
1:complement(3285939..3289649)
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AA seq
1236 aa
AA seq
DB search
MSAVSQPQPALELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADEILVVT
FTKAATAELHERIRGRLAQLAHVLDTGDDGGDPFIARLLETTLGEDGALDPETAAKRIRR
ALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFDMEADDASLRFELAADFWRTRVEPAA
ARWPGFATWLVESGAGPDALDTQLARRLKKPLAALRWDGVTEPDESAEAAAAECFAEAAR
MWAAERDAIDALLRAAQPALNQRSHKPDAVADALDAWAAHFAQGDATAALPKAALKLTRT
TLVKATKKGGATPEHAFFDVADALEAAVAAAEATQRARWLALIAEWLDMAPGELAERKRT
RRVVSFDDLLANLYHALHAHPWLAETLRARYPAALIDEFQDTDPLQFAIFNRIFAPGGPL
FLVGDPKQAIYSFRAADLHTYLAARASASACYTLAVNQRSTPAIVDACNRFFMSNPRAFV
LDGLDYYAVRAATRVRAPFVDETDPGPAGDFRVWALPGGEGTLLKRDAQAQAAQACAAEI
ARLMRGAREGRVRLGDTPLSPGNIAVLVQTHRQGSLVKRVLATWGIGSVELAQASVFSTG
DAEQLERVLAAIDAPGDLRRLRSALAADWFGLDAGALWRMEQGDGDASHEASAADSADAM
SWVERFSRYRLLWRERGFAVMWRTFARELRIAERLMAGADGERRVTDINHLAELTQARAS
AQPGIAPTLRWLAAQRLDGGGEEAQLRLESDRNLVQIVTVHKSKGLEYAIVFCPFLNDGG
LREPPSSALPDAREYHDDAGDAVLHYGCDGEAAAHAARQAMREQAAERARLVYVALTRAV
YRCYVVAGPYQSSRSTREARRSVLNWLVAGAGQSFDAWLDEPPDEAALDAAWLALAGGPV
SVAPLPVPARRERLAAGHDASQTLAARQATRALRDAWRMASFSSLTASMAREEAGVAAVP
DDELRPDHDALAAAMPDGEFILADTVAPEPPDDDILVFPRGAAAGECLHRLFELSRFTEP
ESWHKAALGALHDRPVEAEPELATRLPAMMARLVDDVVRTELVPGMRLADLDPAKRLDEM
GFLFPAPSLDLTALRRLLVAHGYPDVALEAGMLAGFIKGFIDMIVEHDGRFWIVDWKSNH
LGTTPDAYGPRALDVAMADHAYHLQALLYTVALHRYLRGRLPDYDYDTHIAGYLYLFVRG
VRPDWRSGGEPAGVHARRPERALVDALDRMMEGGRA
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgtgtcgcagccgcagccagcgctcgaactcgacgtgttcgcgtgcccgctc
gacggcgtcaaccagatcgaggcgtcagccggcaccggcaagacctggaacatctgcgcg
ctgtacgtgcgcctgctgctcgaaaaggatctcggcgccgacgaaatcctcgtcgtgacc
ttcacgaaggcggcaacggccgagctgcacgagcggattcgcggccggctcgcgcagctc
gcgcacgtgctcgacacgggcgacgacggcggcgatccgttcatcgcgcgcctgctcgag
accacgctcggcgaagacggcgcgctcgaccccgagacagccgcgaagcggatccggcgt
gcactgcgcgcgttcgaccaggccgcgatccatacgatccacgcgttctgccagcgcgcg
ctgcaggaagcgccgttcgcggccgcgatgccgttcgcattcgacatggaggccgacgac
gcgtcgctgcgcttcgaactcgcggcggacttctggcgcacgcgcgtcgaaccggcggcc
gcgcgctggccgggcttcgcgacctggctcgtcgaatcgggtgcgggcccggacgcgctc
gatacgcagctcgcgcgccggctgaagaagccgctcgccgcgctgcgctgggacggcgtg
accgagccggacgaatcggccgaggccgccgcggccgaatgctttgccgaggcggcgcgg
atgtgggcggccgaacgcgatgcgatcgatgcgttgctgcgcgccgcgcagcccgcgctc
aaccagcgctcgcacaagcccgacgcggttgccgacgcgctcgacgcatgggccgcgcat
ttcgcgcaaggcgacgcgacggccgcgctgccgaaggccgcactgaagctcacgcgcacc
acgctcgtgaaagcgacgaaaaaaggcggcgcgacgccggaacacgcgttcttcgacgtg
gccgacgcgctcgaagcggccgtggcggcagccgaggcaacgcagcgcgcgcgctggctc
gcgctgatcgccgaatggctcgacatggcgcccggcgagttggccgagcgcaagcgtacg
cggcgcgtcgtgtcgttcgacgatctgctcgcgaacctgtatcacgcgctgcatgcgcat
ccgtggctcgccgagacgctgcgcgcgcgctatccggccgcgctgatcgacgagttccag
gataccgacccgttgcagttcgcgatcttcaaccggatcttcgcgccgggcgggccgctg
ttcctcgtcggcgatccgaagcaggcgatctacagcttccgcgcggccgatctgcatacc
tatcttgcggcgcgcgcgagcgcgagcgcgtgctacacgctcgcggtcaaccagcgctcg
acgcctgcgatcgtcgatgcgtgcaaccgcttcttcatgtcgaatccgcgcgcgttcgtg
ctcgacgggctcgactattacgcggtgcgtgccgccacgcgcgtgcgtgcgccgtttgtc
gacgaaaccgatccgggcccggccggcgatttccgggtgtgggcgctgccgggcggcgaa
ggcacgctgctcaagcgcgatgcgcaggcacaggccgcccaggcctgcgcggccgagatc
gcgcggctgatgcgcggcgcgcgcgaagggcgcgtgcggctgggcgacacgccgctgtcg
ccgggcaacatcgcggtgctcgtgcagacgcaccggcagggcagcctcgtgaagcgtgtg
ctcgccacgtggggcatcggcagcgtcgaactggcgcaggcctcggtgttctcgaccggc
gacgccgagcagctcgagcgcgtgctggcggcgatcgatgcgccgggcgacctgcggcgt
ctgcgttcggcgctcgcggccgactggttcggcctcgatgccggcgcgctgtggcggatg
gaacagggcgacggcgatgcgtcgcacgaagcgtctgcggccgacagtgccgatgcgatg
agctgggtcgaacgtttctcgcggtatcggctgctgtggcgcgagcgcggtttcgcggtg
atgtggcgcacgttcgcgcgcgagctgcggatcgcggagcggctgatggccggcgcggac
ggcgaacgccgcgtgaccgacatcaaccacctggccgaactgacgcaggcacgcgcctcg
gcgcagccgggcatcgcgccgacgctgcgctggctcgccgcgcaacggctcgacggcggc
ggcgaggaggcgcagctgcgtcttgaatccgatcgcaacctcgtgcagatcgtgaccgtg
cacaaatcgaagggacttgaatacgcaattgtgttctgtccgttcctgaacgacggcggg
ttgcgcgagccgccgtcgtccgcactgcccgatgcgcgcgagtatcacgacgacgcgggc
gacgcggtgctgcattacggctgtgacggcgaggcggccgcgcacgcggcgcggcaggcg
atgcgcgagcaggccgcggaacgcgcgcggctcgtctacgtggcgctcacgcgcgcggtc
tatcgctgctatgtcgtcgccgggccgtaccagtcgtcgcgctcgacgcgcgaagcgcgg
cgcagcgtgctcaactggctcgtcgccggcgccggccagtcgttcgatgcgtggctcgac
gagccgcccgacgaagccgcgctcgatgccgcgtggcttgcgctcgcgggcggcccggtc
agcgtcgcgccgctgccggtgcccgcgcgccgcgagcgtctcgcggccgggcacgacgcg
tcgcagacgctcgcggcgcgtcaggcgacgcgcgcgctgcgcgatgcgtggcggatggcg
agcttcagctcgctgaccgcgtcgatggcgcgcgaggaggccggcgttgcggccgtgcca
gacgacgagctgcggcccgatcacgatgcgcttgccgcggcgatgccggacggcgagttc
atattggccgacacggttgcacccgaaccgccggacgacgacatcctcgtgttcccgcgc
ggcgcggcggcgggcgagtgcctgcaccggctgttcgaactcagccggttcacggagccc
gagtcgtggcacaaggccgcgcttggcgcgctgcacgaccggccggtcgaggccgagccc
gaactcgcgacgcgtctgccggcgatgatggcgcggctcgtcgacgatgtcgtgcgcacc
gagctcgtgccgggcatgcggctcgccgatctcgatcccgcgaagcggctcgacgaaatg
ggcttcctgttcccggcaccgtcgctcgacctgacggccctgcgtcggctgctggtcgcg
cacggctacccggacgttgcattggaggcgggcatgctcgccggattcatcaagggtttc
atcgatatgatcgtcgaacacgacggccgcttctggatcgtcgactggaagtcgaaccat
ctcggtacgacgccggacgcgtacggcccgcgcgcgctcgacgtcgcgatggccgatcat
gcgtatcacctgcaggcgctgctctacacggtcgcgctgcatcgctacctgcgcgggcgg
ctgcccgattacgactacgacacgcatatcgcgggctacctgtacctgttcgtgcgcggc
gtgcggcccgactggcgcagcggcggcgagccggccggcgtgcatgcgcggcggcccgaa
cgcgcgctcgtcgacgcactcgaccggatgatggaagggggccgcgcatga
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