KEGG   Burkholderia sp. JP2-270: DM992_18040
Entry
DM992_18040       CDS       T07766                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
burk  Burkholderia sp. JP2-270
Pathway
burk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:burk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DM992_18040 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:burk02044]
    DM992_18040 (icmF)
Secretion system [BR:burk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DM992_18040 (icmF)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: AWV01468
UniProt: A0A2U9SSV1
LinkDB
Position
2:complement(84096..87722)
AA seq 1208 aa
MNQAVARFVRPLPSREIWTVAGLVVLACFVWLAGPLFAFAEIRPLESGWARGLTIAVLFA
AWAARVAWRSWRAGRLNAQLLNQLREAAPGPATADDPAKAQLDELRSRFDEAATLLKKVR
FGQADAVRKGLPRWFDRMSRQYLYQLPWYVFIGAPGSGKTTALVNSGLSFPLAEQFGRAA
IRGVGGTRHCDWWFTNDAVLIDTAGRYTTHEGNRALDEAEWKGFVDLLKKYRTRQPLNGA
MLTISVADLLGASEAERTQHAMVLRKRLLELRAQLGIRFPVYLLVTKADLLAGFAEYFGG
YGRTECAQVWGFTFPLAQSEAPGFDLRAAFDREYRLLHQRLNDGLPELLAAQTDARQREM
TYLLPQQIADLQDMLGQFVAEVFSVSSFEPMPMLRGVYLTSGTQEGTAFDRVMSGIKRFL
KIEGVPPVAQVGSTGRSFFLKSLLQEHIFREAALAGSDLRWHQKRRVLRIAGYALLALAC
AAVLVAWLRSYSNNRAYLDQIAARVPAVDSRISGAKFSDASDIARLLPVLDALGGLANAG
GVDLQHPPLAYRWGLFQGEKIDEAVDAVYRRALDDVLLPIAATRMEAALRDARPDETDYA
YAALKAYLMLYDSAHYDPAFVQAVVDLEMERSLPPDFSPAERSALRAHLAALFGNRVAVS
PYPMNERLVADVRDRLRQVPFSQRLYRQLTRTLRPATSAFDVSVARAVGPDASLVFRRQS
GKPLSEGVPGLYTRNGYRNVFAPRLTGEVDAYGREEVWVLNLGLSEIPGPNDAAAWARDI
RQLYLNDYLKIWDDYLADIKLQRTATLAQSIQVARALSSADSPLTRLMVALARDTALGDA
PGGARNLAARAQDKVDEARSSLSQIFAGQPGDANPSAAAPASPEQIVDSHFAGLRAFAPG
SGDQAQGFDAVLKSIDALYTYLTATDDALRSGAQPPPSDAPARLRAQAGRLPTPFREVLD
DLSNVANGSVATVEQRSVALRAGANVGDFCRQAIAGRYPFARGSSRDVAPADFAQMFAPG
GLMDDFFQKNLQSIVDTTSHPWRFANRNADADPSAAAMLASFEKAAVIRDAYFGGGARTA
QLKVQIQPLEMDPSITEMVLDVDGQIVRYAHGPLVQSAVDWPGPRGSNQVRLQVSAQAGA
ADGFTTGGPWALHRLFDRAAVSAGHGSDQMIARFTVDGKPIVLQVNAGSVRNPFRLAQME
SFTCPPKQ
NT seq 3627 nt   +upstreamnt  +downstreamnt
atgaaccaggctgtcgcgcgtttcgtccggccgttgccgtcgcgggagatctggaccgtc
gccggtctggtcgtgctcgcgtgcttcgtgtggctcgcgggcccgctgttcgcgttcgcc
gagatccggccgctcgaaagcggctgggcgcgcggactgacgatcgcggtgctgttcgcc
gcgtgggccgcgcgcgtcgcgtggcgaagctggcgtgccggccgcctcaatgcgcagttg
ctgaaccagttgcgcgaggccgcgccggggccggccaccgccgacgatccggcgaaggcg
cagctcgacgagttgcgcagccgcttcgacgaagccgcgacgctgctgaaaaaggtccgc
ttcgggcaggccgacgcggtgcgcaagggcctgccgcgttggttcgacaggatgtcgcgc
cagtatctgtatcaattgccgtggtacgtattcatcggcgcgccgggctcgggcaagacg
accgcgctcgtgaattccgggctcagctttccgctcgccgagcagttcggccgcgcggcg
attcgcggcgtgggcggcacgcggcactgcgactggtggttcacgaacgacgctgtgctg
atcgacacggccggccgctacacgacgcacgaaggcaaccgcgcgctcgacgaagccgag
tggaaaggcttcgtcgatctgctgaagaaataccgcacgcgccagccgctgaacggcgcg
atgctgacgatcagcgtggccgacctgctcggcgcgtcggaagcggaacgcacgcagcac
gcgatggtgctgcgcaagcggctgctcgaactgcgcgcgcagctcggcatccgttttccc
gtatacctgctcgtgacgaaggccgacctgctcgcgggtttcgccgagtatttcggcggc
tacggccgcacggaatgcgcgcaggtgtggggcttcacgttcccgctcgcgcagagcgag
gcgcccggcttcgacctgcgcgcggcattcgaccgcgaataccggctgctgcaccagcgg
ctgaacgacgggctgcccgaactgctcgccgcgcagaccgatgcgcgccagcgcgagatg
acgtacctgctgccgcagcagatcgccgacctgcaggacatgctcggccagttcgtcgcc
gaggtgttttccgtatcgagcttcgagccgatgccgatgctgcgcggcgtctacctgacg
agcggcacgcaggagggcaccgcgttcgatcgcgtgatgagcggcatcaagcgcttcctg
aagatcgagggcgtgccgccggtcgcgcaggtcggctcgaccgggcgcagcttcttcctg
aagtcgctgctgcaggagcacatcttccgcgaagccgcgctcgccggcagcgacctgcgc
tggcatcagaagcggcgcgtgctgcggatcgccggctacgcgctgctcgcgctcgcatgc
gcggccgtgctggtcgcgtggctgcgcagctattcgaacaaccgcgcgtatctcgaccag
atcgccgcgcgcgtgccggcggtcgattcgcggatcagcggtgcgaagttctccgatgcg
tccgacatcgcgcggctgctgcccgtgctcgatgcgctcggcgggctcgcgaatgcgggc
ggcgtcgacctgcagcatccgccgctcgcatatcggtgggggctgttccagggcgagaag
atcgacgaggccgtcgatgccgtgtaccggcgcgcgctcgacgacgtgctgctgccgatt
gccgcgacccggatggaggccgcgctgcgcgacgcgcggcccgacgaaaccgactacgcg
tatgcggcgctgaaggcgtacctgatgctgtacgacagcgcgcactacgatcccgcgttc
gtgcaggccgtcgtcgatcttgagatggagcgctcgctgccgcccgatttctcgccggcc
gaacgttccgcgctgcgcgcgcatctggccgcgctgttcggcaaccgcgtcgcggtgtcg
ccgtatccgatgaacgagcggctcgtggccgacgtacgcgaccggctgcggcaggtgccg
ttctcgcagcggctgtaccggcagctcacgcgcacattgcgcccggcgacgtccgcgttc
gatgtcagcgtcgcgcgcgcggtcggccccgacgcgtcgctggtgttccggcgccagagc
ggcaaaccgctgtcggaaggcgtgccgggcctctatacgcgcaacggttatcgcaacgtg
ttcgcgccgcgcctgaccggcgaggtcgacgcgtacgggcgcgaggaggtgtgggtgctg
aacctcgggctgtccgaaatccccgggccgaacgacgcggccgcgtgggcgcgcgatatc
cgccagctctacctgaacgactacctgaagatctgggacgactatctcgccgacatcaag
ctgcaacgcacggccacgctcgcgcagagcatccaggtggcgcgcgcgctgtcgtcggcc
gattcgccgctcacgcggctgatggtcgcgctcgcgcgcgacacggcgctcggcgatgcg
ccgggcggggcgcgcaatctcgcagcgcgtgcgcaggacaaggtcgacgaggcgcgcagt
tcgctgtcgcagatcttcgcgggccagcccggcgacgcgaatccgtccgcggcggcgccc
gcgagccccgagcagatcgtcgacagccacttcgccggcttgcgcgcgttcgcgccgggc
agcggcgaccaggcgcagggattcgacgcggtgctgaagtcgatcgatgcgctgtacacg
tacctgacggccaccgacgacgcgctgcgcagcggcgcgcaaccgccgccgtccgacgcg
cccgcgcggctgcgcgcgcaggcaggccgcctgccgacgccgttccgcgaagtgctcgac
gacctgtcgaatgtcgcgaacggcagcgtcgcgaccgtcgagcagcgcagcgtcgcgctg
cgggccggcgcgaatgtcggcgacttctgccggcaggcgatcgcgggccgctatccgttc
gcgcgcggatcgtcgcgcgacgtcgcgccggcggatttcgcgcagatgttcgcgccgggc
ggcctgatggacgatttcttccagaagaacctgcagtcgatcgtcgatacgacgtcgcac
ccgtggcgcttcgcgaaccgcaatgcggacgccgatccgtcggcggccgcgatgctcgcg
tcgttcgagaaggccgcggtgatccgcgacgcgtatttcggcggcggggcgcgcaccgcg
caactgaaggtgcagatccagccgctcgaaatggacccgtcgatcacggagatggtgctc
gacgtcgacgggcagatcgtccgctacgcacacggcccgctcgtgcagagcgcggtggac
tggccgggcccgcgcggcagcaaccaggtgcggctgcaggtgtcggcgcaggccggcgcg
gccgacggtttcacgaccggcgggccgtgggcgctgcaccggctgttcgaccgcgcggcc
gtgtcggccgggcacggctcggaccagatgattgcgcgcttcacggtcgacggcaaaccg
atcgtgctgcaggtgaatgcaggcagcgtccgcaacccgttcaggctggcccagatggag
tcctttacatgccctccgaagcaatga

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