Burkholderia sp. JP2-270: DM992_18330
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Entry
DM992_18330 CDS
T07766
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
burk
Burkholderia sp. JP2-270
Pathway
burk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
burk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DM992_18330
09124 Replication and repair
03420 Nucleotide excision repair
DM992_18330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
burk03021
]
DM992_18330
03036 Chromosome and associated proteins [BR:
burk03036
]
DM992_18330
03400 DNA repair and recombination proteins [BR:
burk03400
]
DM992_18330
Enzymes [BR:
burk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DM992_18330
Transcription machinery [BR:
burk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DM992_18330
Chromosome and associated proteins [BR:
burk03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DM992_18330
DNA repair and recombination proteins [BR:
burk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DM992_18330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
GlgS
ResIII
Motif
Other DBs
NCBI-ProteinID:
AWV03988
UniProt:
A0A2U9T0I7
LinkDB
All DBs
Position
2:complement(149910..152210)
Genome browser
AA seq
766 aa
AA seq
DB search
MSYVVAVRAMCEFTARRGDLDLRFTPAPTALEGIAGHGAVTSNRGARYETEIALTGTWGT
LTVRGRADGYDPVANRVEEIKTYRGSLDAMPANHRALHWAQAKVYAHLMCDARGLAEIDV
ALVYFDIVSERETVLTETLDAHTLAAFFAEQCACFVGWAERETAHRAARDAALRALAFPH
GRFRSGQRELAVAVYRAARDERCLMAQAPTGIGKTLGTVFPLLKACGEGELDHVFFLTAK
TPGRALALEAAAALGAGTPTLPLRVLELVARDKACEHPDKACHGESCPLAQGFYDRLPAA
RDAAIGAGLLDRDTVRAAALARDVCPYYLAQELARWSDMMIGDYNYYYDGSAMLHTLAQQ
NQWRVGVLVDEAHNLLDRARKMYSASLDPFAFAAARDAAPAALRKAFDRLARAWGTVNRA
QAERYAAYPDIPGPIVSAVQNLVAAIGEHLTDAPRANGDALLRFHFEAIQFGVLAEAFDS
ASIFDATLHGEPMPRQPALDGVASAGRRRRVQSTLCVRNVIPAGFLAPRYEAARATVLFS
GTLSPFHFYRDTLGLPGDTGWLDVDGPFRAEQLTVRVASHVSTRWRDRDRSLEPIADLIA
AQYATRPGNYLGFLSSFDYLGRVVALMQTRHPDVPVWAQAPGMAESERDAFLARFDAGGR
GVGFAVLGGAFSEGVDLVGERLIGAFIATLGLPQVNDVNEQMRRAMDARFGNGYDYMYLY
PGLQKVVQAAGRVIRTEHDEGVVHLIDDRYRRREVRDLLPRWWRIG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
gtgagttacgtcgtcgcggtgcgggcaatgtgcgaattcaccgcgcggcgcggcgatctc
gacctgcgcttcacgcctgcgccgaccgcgctcgaaggcatcgccggccacggcgcggtc
acgtcgaaccgcggcgcgcgttatgaaaccgagatcgcgctgacgggcacatggggcacg
cttactgtgcgcggccgcgcggacggctacgatcccgtggcgaaccgcgtcgaggaaatc
aagacctatcgcggcagtctcgacgcgatgccggcgaaccaccgcgcgctgcactgggcg
caggcgaaggtctatgcgcacctgatgtgcgacgcgcgcggcctcgcggagatcgacgtc
gcgctcgtgtatttcgacatcgtgtccgagcgcgagaccgtcctgacggaaacgctggac
gcgcacacgctagcggcgttctttgccgagcagtgcgcgtgcttcgtcggctgggcggag
cgcgagacggcccatcgcgcggcgcgcgatgcggcgctgcgcgcgctcgcgtttccgcac
gggcggttccgcagcggccagcgcgagctggcggtcgccgtctatcgcgcagcgcgcgac
gagcgctgcctgatggcgcaggcgccgaccggcatcggcaagacgctcggcaccgtgttc
ccgctgctgaaggcctgcggcgagggcgagctcgaccatgtgttcttcctcaccgcgaaa
acgcccggacgcgcgctcgcgctcgaagcggcggcggcgctcggcgccggcacgcccacg
ctgccgctgcgcgtgctggagctcgttgcccgcgacaaggcgtgcgagcatccggacaaa
gcgtgccacggcgagtcgtgcccgctcgcgcaaggcttctacgaccggctgccggccgcg
cgcgacgcggcgatcggcgccgggctgctcgatcgcgataccgtgcgcgcggccgcgctt
gcgcgcgacgtctgcccgtactacctcgcgcaggagctcgcgcgctggtcggacatgatg
atcggcgactacaactactactacgacggcagcgcgatgctgcacacgctcgcgcagcag
aaccagtggcgcgtcggcgtgctcgtcgacgaggcgcacaacctgctcgaccgcgcgcgc
aagatgtacagcgcgtcgctcgatccgttcgcgttcgcggccgcgcgcgacgccgcgccc
gcggcgctgcgcaaggcgttcgaccggctcgcccgcgcatggggcacggtcaatcgcgcg
caggccgaacgctatgcggcgtatccggacattccaggcccgatcgtatcggccgtgcag
aacctcgtcgcggcgatcggcgaacacctgaccgacgcgccgcgcgcgaacggcgacgcg
ctgctgcgctttcatttcgaggcgatccagttcggcgtgctcgccgaagccttcgacagc
gcgtcgatcttcgacgcgacgctgcacggcgagccgatgccgcgccagccggcgctcgac
ggcgtcgcgtcggccggccgccggcgccgcgtccagtcgacgctgtgcgtgcgcaacgtg
atcccggccggatttctcgcgccgcgctacgaagccgcgcgcgcgaccgtgctgttctcg
ggcacgctgagcccgttccatttctatcgcgacacgctcgggctgcccggcgatacgggc
tggctcgacgtcgacgggccgttccgcgccgagcaactgacggtgcgcgtcgcgagccac
gtgtcgacgcgctggcgcgaccgcgaccgatcgctcgaaccgatcgccgacctgatcgcc
gcgcaatacgcgaccaggcccggcaactacctcggcttcctgagcagcttcgactacctg
gggcgcgtggtcgcgctgatgcagacgcgccatccggacgtgccggtctgggctcaggcg
cccggcatggctgaaagcgagcgcgacgcgtttctcgcgcgcttcgacgcgggcgggcgc
ggcgtcggcttcgcggtgctgggcggtgcgttctcggaaggcgtggacctggtcggcgaa
cggctgatcggtgcgttcatcgcgacgctcgggttgccgcaggtcaacgatgtcaacgag
cagatgcggcgcgcgatggacgcgcgcttcggcaacggctacgactacatgtacctgtat
ccgggcttgcagaaggtcgtgcaggcggccgggcgcgtgatccgcaccgagcacgacgaa
ggcgtcgtgcatctgatcgacgatcgttatcggcggcgggaggtgcgcgatctgctgccg
cggtggtggcggatcgggtga
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