Burkholderia sp. JP2-270: DM992_18960
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Entry
DM992_18960 CDS
T07766
Name
(GenBank) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
burk
Burkholderia sp. JP2-270
Pathway
burk00100
Steroid biosynthesis
burk00909
Sesquiterpenoid and triterpenoid biosynthesis
burk01100
Metabolic pathways
burk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
burk00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
DM992_18960
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
DM992_18960
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
burk01006
]
DM992_18960
Enzymes [BR:
burk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
DM992_18960
Prenyltransferases [BR:
burk01006
]
Terpene biosynthesis
Squalene/phytoene synthase
DM992_18960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AWV01623
LinkDB
All DBs
Position
2:complement(285900..286964)
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AA seq
354 aa
AA seq
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MTTRTDSAYLLGDLLKNVSRSFYLTLRVLPDGMRDPVGLAYLLARAADTIADTALVAPDR
RAALLTDLRDEVERLGDGAALSRSLDDVTRMQTDSHEHVLLGSMEPMLALLRAQPDADRA
SIRKVVATLTSGMEFDLRTFPDEQSGQVASLPTRDLLDRYTYLVAGCVGEFWTDMTGAHT
RAARGWDLPDMREKGIRFGKALQMTNILRDCAKDLRIGRCYLPDDVLRAHGLGVADLMQP
DASARARGVLVDLLRIALDQYRDACLYTLAIPRRFVRLRLACLWPIMIGLETLELLAGHD
AWLDPAKPAKVPRKRIYRIMASSLALVGSNTAIRARMTALADAVNARLASPASR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccgaaccgattccgcctacctgctcggcgacctgctgaagaacgtttcccgc
tccttctacctgacgctgcgcgtgctgcccgacggcatgcgcgacccggtcgggctcgcg
tacctgctcgcgcgcgcggccgacacgattgccgataccgccctcgtcgcgcccgatcgc
cgcgcggcgttgctgaccgacctgcgcgacgaggtcgagcggctcggcgacggcgcggcc
ctgtcgcgttcgctcgacgacgtgacgcggatgcagacggattcgcacgagcacgtgctg
ctcggctcgatggagccgatgctcgcgctgctgcgcgcgcagccggacgccgaccgcgcg
tcgatccgcaaggtcgtcgcgacgctgacttcgggcatggaattcgacctgcgcacgttt
ccggatgagcagtcggggcaggtcgcatcgctgccgacgcgcgacctgctcgatcgctac
acgtatctcgtcgcgggctgcgtcggcgagttctggaccgacatgacgggcgcgcacacg
cgtgccgcgcgcggttgggatttgccggacatgcgcgagaagggcattcgtttcggcaag
gcgctgcagatgaccaacatcctgcgcgactgcgcgaaggacctgcgcatcggccgctgc
tacctgcccgacgacgtgctgcgcgcgcacgggctcggcgttgccgacctgatgcagccc
gacgcgtcggcacgtgcgcgcggcgtgctggtcgacctgctgcgcatcgcgctcgaccag
tatcgcgacgcgtgcctgtatacgctcgcaattccgcgccgcttcgtgcggctgcggctc
gcgtgcctgtggccgatcatgatcggcctcgaaacgctcgagctgctggccggtcacgat
gcttggctcgacccggcgaagccggccaaggtgccgagaaaacgcatctaccggatcatg
gcgtcgtcgctcgcgctggtcggctcgaacacggcgatccgtgcgcgcatgaccgcgctc
gccgatgctgtgaacgcgcggcttgcctcgccggcatcgcgttga
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