Burkholderia sp. JP2-270: DM992_20335
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Entry
DM992_20335 CDS
T07766
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
burk
Burkholderia sp. JP2-270
Pathway
burk00330
Arginine and proline metabolism
burk00480
Glutathione metabolism
burk01100
Metabolic pathways
burk01110
Biosynthesis of secondary metabolites
burk04148
Efferocytosis
Module
burk_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
burk00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
DM992_20335
09106 Metabolism of other amino acids
00480 Glutathione metabolism
DM992_20335
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
DM992_20335
Enzymes [BR:
burk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
DM992_20335
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
HSD_C
Motif
Other DBs
NCBI-ProteinID:
AWV01862
LinkDB
All DBs
Position
2:590366..592585
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AA seq
739 aa
AA seq
DB search
MRFPFPHIYRRVRVSLLKIAVEPALIGAFLTTHEQVDVFQTDFTNIAAIVVGIDAAQKIL
KTVERTGFAIPFFVAVEPDQEVPPSVLPSASGVIQLGHGSRHYYGRQISAAADIYSENLL
PPFFKVMREYVQRGYVEFDCPGHQGGQFFSNHPLGRMFVDFFGETLFRADLCNADVRLGD
LLIHEGPALEAQRNAARIYNADKTWFVLNGTSTSNKVVTSALLAPDDLVLFDRNNHKSVH
LGALVVSGARPVYLETARNAWGLIGGVDSAALGEARIRDAIRDVAPERADLPRPFRLAVI
QLGTYDGTIYNAREIVDRIGHLCDYILFDSAWVGYEQFIPMMQDCSPLMLTLGPDDPGIF
VTQSVHKQQAGFSQTSQIHKKDSHIEGQKRFCDHRRFNNAYMIHASTSPFYPMFAALDVN
AQMHAGPAGKRLWRDCVAHGVDARKLLLKTCRQIRPFVPQHVDGRPWADYPTEQIVDDLR
FFRFHPADTWHGFEGYANDQYFVDPCKLLLTTPGIDRDTHEYAPFGAPAPILARYLREHG
VVPEKADLYTILFLLTPSESLGKLQHLIAHLAQFERHLDQDTPLREAIPSLCEAYPELYG
NMRLRQLCQRMHDFYRSHDMKHLQKQMFRRAQFPKQAMLPQAANAELIRNNVELVTLDRI
EGRIATEGALPYPPGIFCVVPGEAWGGPALDYFRALEAGINALPGFEPEIQGVYLQTKPD
GTKQASAYVVADDTRASLA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcggttcccgtttccgcacatttaccggagagttcgcgtgagcctgttgaaaatcgca
gtcgagccggcgctgattggcgcctttctcaccacgcacgaacaggtcgacgtatttcag
accgatttcacgaatatcgcggcaatcgtcgtcggaatcgatgcggcgcagaagatcctg
aaaacggtcgaaagaaccggcttcgcgattccgttcttcgtcgcggtcgagcccgaccag
gaagtgccgccgtcggtcctgccgagcgcgagcggcgtgatccagctcgggcacggcagc
cgccactactacggccggcagatttcagccgccgccgatatctatagcgagaacctgctg
ccgccgttcttcaaggtcatgcgcgaatacgtgcagcgcggctacgtcgagttcgactgc
cccggccaccagggcggccagttcttctcgaatcatccgctcggccgaatgttcgtcgac
ttcttcggcgagacactgtttcgcgccgacctctgcaacgcggacgtccggctcggcgac
ctgctgatccacgaaggcccggcgctggaagcgcagcgcaacgccgcgcggatctacaac
gccgacaagacctggttcgtgctgaacggcacgtcgacgtcgaacaaggtcgtcacgagc
gcgctgctcgcgcccgacgatctcgtgctgttcgatcgcaacaaccacaagtcggtgcac
ctcggcgcgctcgtggtgtccggcgcgcggccggtctacctcgaaaccgcgcgcaacgcg
tggggcctcatcggcggcgtcgacagcgcggcgctcggcgaagcgcgcattcgcgacgcg
atccgcgacgtcgcgcccgaacgcgccgacctgccgcgcccgttccggctcgcggtgatc
cagctcggcacctacgacggcacgatctacaacgcgcgggaaatcgtcgaccggatcggg
catctgtgcgactacatcctgttcgattcggcgtgggtcggctacgagcagttcatcccg
atgatgcaggactgctcgccgctgatgctgacgctcggccccgacgatcccggcatcttc
gtcacgcagtcggtgcacaagcagcaggccggcttctcacagacgtcgcagatccacaag
aaggacagccacatcgaaggccagaagcgtttctgcgatcaccggcgcttcaacaacgcg
tacatgatccatgcgtcgacgagcccgttctatccgatgttcgcggcgctcgacgtcaat
gcacagatgcacgcgggcccggccggcaagcgcttgtggcgcgactgcgtcgcgcacggc
gtcgatgcgcgcaagctgctgctgaagacctgccgccagatccgtccgttcgttccgcag
catgtcgacggccgcccgtgggccgactacccgaccgagcagatcgtcgacgacctgcgc
ttcttccgcttccatccggccgacacgtggcatggcttcgaaggctatgcgaacgaccag
tacttcgtcgatccgtgcaagctgctgctgacgacacccggcatcgatcgcgacacgcac
gagtacgcgccgttcggcgcgccggcgccgatcctcgcgcgctacctgcgcgagcacggc
gtcgtgcccgagaaggccgacctgtacacgatcctgttcctgctcacgccgtccgagagc
ctcggcaagctgcagcatctgatcgcgcacctcgcgcagttcgaacgccacctcgaccag
gacacgccgctgcgcgaagcgatcccgtcgttgtgcgaagcgtatccggagctgtacggc
aacatgcgcctgcggcagttgtgccagcgcatgcacgatttctatcgcagccacgacatg
aagcatctgcagaagcagatgttccggcgtgcacagttcccgaagcaggcgatgctgccg
caggccgcgaatgccgagctgatccgcaacaacgtcgagctcgtcacgctcgatcgcatc
gaaggccggatcgcgaccgaaggcgcgctgccctatccgcccggcatcttctgcgtggtg
cccggcgaagcgtggggcggcccggcgctcgactacttccgcgcgctcgaagccgggatc
aacgcgctgccggggttcgagccggagattcagggcgtctacctgcagacaaagccggac
ggcacgaagcaggcatcggcgtacgtggtggccgacgacacgcgcgcgtcgctggcctga
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