Burkholderia sp. JP2-270: DM992_23360
Help
Entry
DM992_23360 CDS
T07766
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
burk
Burkholderia sp. JP2-270
Brite
KEGG Orthology (KO) [BR:
burk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
burk03000
]
DM992_23360
Transcription factors [BR:
burk03000
]
Prokaryotic type
Helix-turn-helix
Other families
DM992_23360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
GAF
HTH_30
PAS_4
HTH_23
HTH_Tnp_ISL3
HTH_29
AAA
AAA_5
HTH_7
HTH_28
HTH_50
AAA_2
HTH_22
AAA_16
HTH_1
NUMOD1
AAA_22
AAA_7
Xre-like-HTH
Parvo_NS1
HTH_17
TIP49
HTH_38
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
AWV02370
LinkDB
All DBs
Position
2:complement(1200449..1202464)
Genome browser
AA seq
671 aa
AA seq
DB search
MRDDVDQAAGTRAAHPAGWPAPSIQKAHERSETFGLQVSARPDYDVLSSAALVLKREQSR
VLCVHAMPVMETLHEQIVNTQSMIVLTDAEGLILHSIGDDDFLRRAEKVALRPGANWAES
RQGTNAIGTALAELCPMVVHGDQHFLAANRFLTCSSVPILDPYGDAIGVLDVTGDHRSYH
QHTMALAKMSVQMIENHLFTTTFQETLQVSFHGRPEFLGTLMEGIVAFTADGRFLSANRS
AQFQLGMPLAVLRAHTLSSLFDITSAQLIDRMRASTDRHLMLNLGTGAVVCARVHFRRAT
LAEGSRPTDVHGAGAPAARANAVPAPAAGTSAGLSRLNYLDTGDPQVACVIAKVRKVIGK
DIPILITGETGTGKELLAQAIHNDSPRRDGPFVAVNCASIPETLIESELFGYEEGAFTGA
RRKGAIGKLLQANGGTLFLDEIGDMPYPLQVRLLRVLQERLVNPLGSTKTIAVDISIICA
THRDLRDMIAQNRFREDLYYRLNGLVVRLPPLRDRTDLAVVVQKMLQREAFAGTDRPPLS
VAPEVMALFVRCTWPGNFRQLGNLLRTAAAMVDDDGEIRREHLPDDFFDDLRRGDAPAEQ
GAPEPAAALAAEAFPPADARLQDVAASAIAAALARHGGNVSAAARALGVSRNTIYRKMPA
ADAERQPSDES
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgacgtagatcaggcggccgggactcgggccgcgcatcccgccggctggccc
gcgccgtcgatccagaaagcccatgagcggtccgagacgttcggcctgcaggtatcggca
cgccccgactacgacgtgctgtcgagcgcggcgctggtgctgaagcgcgagcagagccgc
gtgctgtgcgtgcacgcgatgccggtgatggagacgctgcacgagcagatcgtcaacacg
cagagcatgatcgtgctgaccgacgcggaaggcctgatcctgcattcgatcggcgacgac
gatttcctgcgccgcgcggagaaggtcgcgctgcgcccgggcgcgaactgggcggagagc
cggcagggcaccaacgcgatcggcacggcgctcgccgagctgtgcccgatggtcgtccac
ggcgaccagcacttcctggccgcgaaccgcttcctgacctgttcgagcgtgccgatcctc
gacccgtacggcgacgcgatcggcgtgctcgacgtgacgggcgaccaccgcagctatcac
cagcacacgatggcgctcgcgaagatgtcggtgcagatgatcgagaatcacctgtttacg
acgacctttcaggaaacgctgcaggtgtcgttccatggccgtcccgagttcctcggcacg
ctgatggaggggatcgtcgcgttcaccgccgacggccgcttcctgtcggccaatcgcagc
gcgcagttccagctcggcatgccgctcgcggtgctgcgcgcgcacacgctgtcgtcgctg
ttcgacatcacgagcgcgcagctgatcgaccgcatgcgcgcgagtaccgaccggcacctg
atgctgaacctcggcaccggcgcggtggtctgcgcgcgcgtgcacttccggcgtgcgacg
ctcgcggaaggcagccggccgacggacgtccacggcgcgggcgcgccggccgcgcgtgcg
aacgcggtaccggcgccggcggcgggcacgtcggcgggcctgtcgcggctcaactatctc
gacaccggcgatccgcaggtcgcgtgcgtgatcgcgaaggtgcgcaaggtgatcggcaag
gacattccgatcctgatcaccggagagaccggcaccggcaaggaactgctcgcgcaggcg
atccacaacgactcgccgcgtcgcgacgggccgttcgtcgcggtcaactgcgcgtcgatt
ccggagacgctgatcgaatccgagctgttcggctatgaggagggcgcattcaccggcgcg
cgccgcaagggggcgatcggcaagctgctgcaggcgaacggcggcacactgttcctcgac
gaaatcggcgacatgccgtatccgctgcaggtgcggctgctgcgcgtgctgcaggagcgc
ctcgtcaacccgctcgggtcgacgaagacgatcgccgtggacatctcgatcatctgcgcg
acgcaccgcgacctgcgcgacatgattgcgcagaaccgcttccgcgaggatctctactac
cggctgaacggcctcgtggtgcgcctgccgccgctgcgcgaccgcaccgatctcgcggtc
gtcgtgcagaagatgctgcaacgggaagcattcgcgggcaccgaccggccgccgctctcc
gtcgcgccggaagtgatggcgctgttcgtgcgctgcacgtggcccggcaacttccgccag
ctcggcaacctgctgcgcacggcggcggcgatggtcgacgacgatggcgaaatccggcgc
gagcacctgccggacgatttcttcgacgacctgcgccgcggcgatgcgccggccgagcag
ggcgcgcccgagccggccgccgcgctcgccgcggaggcattcccgcccgcagacgcgcgt
ttgcaggacgtcgccgcgtccgcgatcgccgccgcgctggcccgtcacggcggcaacgtg
tcggccgcggcgcgcgcgctcggcgtgtcgcgcaacacgatctaccggaagatgcctgcg
gccgacgcggagcgccaaccgtccgacgaaagctga
DBGET
integrated database retrieval system
