Burkholderia sp. JP2-270: DM992_23390
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Entry
DM992_23390 CDS
T07766
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
burk
Burkholderia sp. JP2-270
Pathway
burk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
burk00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DM992_23390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
burk03021
]
DM992_23390
Transcription machinery [BR:
burk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DM992_23390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r1_1
Sigma70_ner
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AWV02375
LinkDB
All DBs
Position
2:1210161..1212044
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AA seq
627 aa
AA seq
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MRNVPDLAGDAAPHRGADAERAAHLHALIALGIERGYVTRGEIVDALPDEAAEDADFDAT
ASMLGELGIEMREHVDSRSVWTFDRHFARATDASAPLADASPSLATADLLAGRTNDPVRI
YLREMGATPLLEREEEIALALQLESGRAACIAALSRDPAALCAIASIAADIRAGKVAASV
YMTGFVRDSDTHAEMSADSPASDAAPDPDFDSSPLDDESDQFPDDTASRDAIAESLDRAA
ALASRMSETLRTAGFSSAGYRSLMREAAVLTGGIRFTARAIERIGSAIRERATQARQLEK
RITATLAEAGILTDAPHHGLFAPCDDVRSWLDACTTGHPGCAAALARRAPVLIEARTALA
QLAGQPGLPLDIAIAIDARLSRIDRAIQPARKKLFQSNLRLVVSIAKRYPDRGLQFLDLI
QEGNIGLMKAVERYDHRRGFKFGTYATWWVRQAITHAIADQGRTIRVPAHTVDAINKLSR
LARTHAQQTGHAADAPSLSTQMQLPVGKVRDLMSIVREPVSADTPVSPDHDLTLCDVVID
HDAPTPEESASAGQLRAAVATLIDNLPAREAWILRLRYGIDVESEYSLREIGRQLNLSAE
RVRQIEASALERIRQFRHAPTLRSLIA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacgtgcctgatctcgctggcgacgccgcgccgcatcgcggcgcggatgccgaa
cgcgcagcgcatctgcatgcgctgatcgcactcggcatcgagcgcggctacgtgacgcgc
ggcgaaatcgtcgatgcgctgcccgacgaagcggctgaagacgcggatttcgacgcgacc
gcgtcgatgctcggcgagctgggcatcgagatgcgcgagcatgtcgactcgcgaagcgtg
tggacgttcgatcgtcatttcgcgcgagcgacggacgcgtcagcgccgctcgccgatgca
tcgccgtcgctcgcgaccgccgatctgctcgcgggccgcacgaacgatcccgtgcggatc
tatctgcgcgaaatgggcgcgacaccgctgctcgaacgcgaagaagagatcgcgctcgcg
cttcaactggaaagcggtcgcgcggcatgcatcgccgcgctgagtcgcgatccggctgcg
ctgtgcgccatcgcgtcgattgccgccgacatccgtgcgggcaaggtagccgcttccgtc
tatatgacagggttcgtccgcgattccgacacgcacgcggaaatgtccgcggactcgccc
gcgagcgacgcggcgcccgatccggatttcgattcgtcgccgctggacgacgaatccgac
cagtttccggacgacaccgcatcgcgcgatgccatcgccgaatcgctcgaccgcgccgcc
gcgctggcatcgcggatgagcgaaacgctgcgcaccgcaggcttctcatccgccggctat
cggtcgctgatgcgcgaggccgccgtgctgaccggcgggatccgctttaccgcacgggcg
atcgagcgcatcggcagcgcaattcgcgaacgcgcgacgcaggctcgccagctcgagaaa
cgcatcacggcaacgttggccgaagccggcatcctcaccgatgcgccgcaccacggcctg
ttcgcgccgtgcgacgacgtccgctcatggctcgacgcatgcacgaccgggcatcccggc
tgcgccgccgcgctcgcgcggcgcgcaccggtgctgatcgaagcgcgaaccgcgcttgcg
cagcttgccggccagccgggcctgccgctcgacatcgcgatcgcaatcgacgcgcgactg
tcgcgcatcgatcgcgcgatacagcccgcgaggaagaagctgttccagagcaacctgcgg
ctcgtcgtgtcgatcgccaaacggtatcccgatcgcggcctgcagttcctcgatctgatc
caggaaggcaatatcgggctgatgaaggcggtcgagcgctacgaccaccggcgcggcttc
aagttcgggacgtacgcaacctggtgggtccgacaggccatcacgcatgcgatcgccgat
cagggccgcacgatacgggtgcccgcgcatacggtcgacgcgatcaacaagctgtcgcgt
cttgcgcgaacgcatgcgcaacagaccggccatgcggccgatgcgccgtcgctctccacg
cagatgcagctgcccgtcggcaaggtccgcgacctgatgagcatcgtgcgcgagccggtc
tccgcggacacgcccgtttcgcccgatcacgacctcacgttgtgcgacgtcgtgatcgac
cacgacgcgccgaccccggaagaatccgcgagcgccggccagcttcgcgccgcggttgct
acgctgatcgacaacctgccggcgcgcgaagcatggattcttcgcttgcggtatggcatc
gacgtcgaaagcgagtattcgttgcgcgaaatcggccgacaactgaacctgtcagccgaa
cgcgttcgccagatcgaggcgtcggcgctcgaacgaatcagacaattcaggcacgcgccg
acacttcgatcgctgatcgcctga
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