Burkholderia sp. JP2-270: DM992_28405
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Entry
DM992_28405 CDS
T07766
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
burk
Burkholderia sp. JP2-270
Pathway
burk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
burk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DM992_28405
Enzymes [BR:
burk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
DM992_28405
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_9
PAS_4
Motif
Other DBs
NCBI-ProteinID:
AWV03208
LinkDB
All DBs
Position
2:2277002..2279005
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AA seq
667 aa
AA seq
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MDDENDSAVLEAHVGTRSPCWRLGSDSNALELAAVRGLTNVAVALTVEQAARIRALTGVT
SHLVLDIALYGEPVSLHLVGRKVNTTDWAGTASAYSDAVSVAEDLSHGLAFAEQVVSEVN
SLVVILDRNGMVQRFNHLCEEVTGKREVDVIGRSAFELFMSPEQGAQSRSNITGFFASNH
SFAVERYINTVNGPRLFQFRNKFVQSGSGIEEQFLICSGIDITEERNAQHRLIELANTDV
LTGLPNRHAISERIHVAIADENAASRGQVGILFLDLDNFKRVNDHYGHITGDRLLQDVSK
IISGCLPAGATLARLGGDEFLVLFEHGTRPLLEATAQIILERMRTPIHLGLMEIYTSCSI
GIAMHPQHGDSLETLVRSADTAMYVAKEEGKHTYRVFSLEMNQKVAKYMWLDTNLRKALE
EEQFVLHYQPVVDIATGDVRSVEALIRWQSPDRGLVAPIEFIRFAEESGLIAPLGRWVMR
TAAAQAAAWKAKGLGIRIAVNVSARQLQDMNIVHQFASILDGAGLKPGLLDIELTESCFI
EDENSANGLMRQFRQLGAEIHLDDFGTGYSSLSQLSRLPLDAIKLDRTFITGIDRNPRSQ
ALVRSVVSLAKALNFAVIAEGVETYAEADFLKQLNVDHAQGYYYARPMPAQAFEAWLAET
RKLRLIA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaaaacgatagcgcggtgctcgaggcgcatgtcggtacgcgcagcccctgc
tggcgtctcggcagcgacagcaatgcgctcgaactggccgccgtccgcggcctgaccaac
gtcgccgtcgcgctgacggtcgagcaggccgcgcgcatccgtgcgctgacgggtgtcacg
tcgcacctcgtgctcgacatcgcgctgtacggcgagccggtcagcctccatctcgtcggc
aggaaggtcaatacgaccgactgggccggcacggcctccgcgtattccgatgccgtgtcc
gtcgcggaagatctctcgcacgggctcgcgttcgcggagcaggtcgtgtccgaagtgaat
tcgctggtcgtgatcctcgaccgcaacgggatggtgcagcgcttcaaccacctgtgcgag
gaagtgacgggcaagcgcgaggtcgacgtgatcggccgcagcgcgttcgaactgttcatg
agccccgaacagggcgcgcagtcgcgcagcaacatcacgggctttttcgcgagcaaccac
tcgttcgcggtcgagcgctacatcaacacggtcaacgggccgcgcctgttccagttccgc
aacaagttcgtgcagagcggcagcggcatcgaagagcagttcctgatctgctcgggcatc
gacatcaccgaggagcgcaacgcgcagcatcggctcatcgaactcgcgaacaccgacgtg
ctcaccgggctgccgaaccgtcatgcgatcagcgagcgcatccatgtggcgatcgccgac
gagaacgccgcgtcgcgcggccaggtcggcatcttgttcctcgatctcgacaacttcaag
cgcgtcaacgatcactacgggcacatcaccggcgaccgcctgctgcaggacgtgtcgaag
atcatcagcggctgcctgccggccggcgcgacgctcgcgcggctcggcggcgacgaattc
ctcgtgctgttcgagcacggcacgcggccgctgctcgaggcgactgcgcagatcatcctc
gaacggatgcgcacgccgatccatctcgggctgatggagatctacacgagctgctcgatc
ggcatcgcgatgcatccgcagcacggcgattcgctcgagacgctggtccgcagcgcggac
accgcgatgtatgtcgcgaaggaagaaggcaagcatacgtaccgcgtgttctcgctggag
atgaaccagaaggtcgcgaagtacatgtggctcgacacgaacttgcgcaaggcgctcgag
gaggagcagttcgtgctgcactaccagccggtcgtcgatatcgcgaccggcgacgtgcgc
agcgtcgaggcgctgatccgctggcagtcgcccgatcgcgggctcgtcgcgccgatcgag
ttcatccgcttcgcggaggagtcggggctgatcgcaccgctcgggcgctgggtaatgcgc
actgcagccgcgcaggccgccgcgtggaaggcgaaggggctcggcatccggatcgcggtg
aacgtgtccgcgcggcagttgcaggacatgaacatcgtgcaccagttcgcatcgattctc
gacggcgcggggctcaagcccggcctgctcgacatcgaactgaccgagagctgcttcatc
gaggacgagaattccgccaacgggctgatgcggcagttccgccagctcggcgcggagatc
catctcgacgatttcggcaccggctattcgtcgctgtcgcagttgtcgcgactgccgctc
gacgcgatcaagctcgatcgcaccttcatcacgggcatcgaccgcaatccgcgctcgcag
gcgctggtgcgctcggtcgtgtcgctcgcgaaggcgctgaatttcgcggtaatcgccgaa
ggcgtcgagacgtatgcggaagccgatttcctcaagcagctcaatgtcgatcacgctcag
ggttactactacgcacggcccatgccggcgcaggcattcgaggcgtggctcgccgagacg
agaaagctcaggctgatcgcctga
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