Burkholderia sp. JP2-270: DM992_29155
Help
Entry
DM992_29155 CDS
T07766
Name
(GenBank) sigma 54-dependent transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
burk
Burkholderia sp. JP2-270
Brite
KEGG Orthology (KO) [BR:
burk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
burk03000
]
DM992_29155
Transcription factors [BR:
burk03000
]
Prokaryotic type
Other transcription factors
Others
DM992_29155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_22
MCM
AAA_30
AAA_7
AAA_19
NACHT
AAA_2
AAA_33
BrxC_BrxD
T2SSE
AAA_14
TniB
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AWV03334
UniProt:
A0A2U9SWI6
LinkDB
All DBs
Position
2:2448424..2450043
Genome browser
AA seq
539 aa
AA seq
DB search
MRKTVAIGFLGTVLDQGGRAPRRYRKWRPTISLCEQPELPIDRLELLHPLSYTRLANQVR
DDLARLSPHTDVRLTPLTIHDPWDFEEVYATLHDYARAYPFDLEHEDYLIHITTGTHVAQ
ICWFLLAEARYLPARLVQTGPPQRTDEGPSGPGTVSVIDLDLSRYNRIAQRFTRERDETV
SFLKAGIATRNARFNALIEQLERVAVRSRAPMLLVGPTGAGKSFLAKRVYELKRGRHRLA
GPFIEINCATLRGDAAMSTLFGHVKGAFTGAQSARAGLLRAADGGLLFLDEIGELGLDEQ
AMLLKAIEEKRFLPVGADVEASSDFELIAGTHRDLRLMVAAGTFREDLYARINLWTYELP
GLAERREDIEPNLEFELDRFGREQGERVRFNVEAKRRYLAFAASPRAAWAGNFRELSASV
TRMATLADAGRITEELAEQEVERLARTWSSSGGAGASDTWVDAVFGARAAELDLFDRAQL
ERVLDVCRVSASLSEAGRTLFAVSRQSKKQPNDADRLRKYLARFGLDWEGVRLALEAAR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaagacagtcgcaatcggttttctcggcaccgtgctcgaccagggcggtcgtgcg
ccgcgccgctaccggaaatggcggccgacgatctcgctgtgcgagcagcccgaactgccg
atcgaccggctcgagttgctgcatccgctgagctacacgcgcctcgccaaccaggtgcgg
gacgatctcgcgcgcctgtcgccgcacaccgacgtacggctcacgccgctcacgatccac
gacccgtgggatttcgaggaggtctatgcgacgctgcacgactacgcgcgcgcctatccg
ttcgacctcgaacacgaggattacctgatccacatcacgaccggcacgcacgtcgcgcag
atctgctggttcctgctggcggaagcacgctacctgcccgcgcgcctcgtgcagacgggg
ccgccgcagcggaccgacgaagggccgagcgggccgggcacggtgtcggtgatcgatctc
gacctgtcgcgctacaaccggatcgcgcagcgcttcacgcgcgaacgcgacgaaacggtg
tcgttcctgaaggccggcatcgcgacgcgcaacgcgcgcttcaatgcgttgatcgagcaa
ctggagcgcgtggccgtgcgttcgcgcgcgccgatgctgctcgtcgggccgacgggcgcc
ggcaagtcgtttctcgccaagcgcgtgtacgagctgaagcgcggccgccatcggctcgcg
gggccgttcatcgagatcaactgcgcgacgctgcgcggcgacgcggcgatgtcgacactg
ttcggtcacgtgaagggcgcgttcacgggtgcgcagtcggcacgcgcggggctgctgcgc
gcggcggacggcggcctgctgtttctcgacgagatcggcgaactcgggctcgacgaacag
gcgatgctgctgaaggcgatcgaggaaaagcgcttcctgccggtcggcgcggacgtcgag
gcaagcagcgatttcgagctgatcgcgggcacgcaccgcgacctgcggctgatggtggcg
gccggcacgttccgcgaggatctctatgcacggatcaatctgtggacgtacgaactgccg
gggctcgccgagcgtcgcgaggacatcgagccgaacctcgaattcgagctcgaccgtttc
ggtcgcgagcagggcgagcgggtgcgtttcaacgtcgaggcgaagcggcgttatctcgcg
ttcgcggcgtcgccgcgcgcggcgtgggccggtaacttccgcgagttgtcggcctcggtc
acgcggatggcgacgctggccgatgcgggacggatcaccgaggaacttgccgaacaggaa
gtcgagcggctggcgcgcacgtggtcgtcatcgggcggcgcgggtgcgtccgatacgtgg
gtcgatgcggtgttcggcgcgcgtgcggcggaactcgacctgttcgaccgtgcgcagctc
gaacgcgtgctcgacgtgtgccgcgtgtcggcgagcctgtcggaagccgggcgcacgctg
ttcgcggtgtcgcggcagagcaagaagcagccgaacgatgcggatcggctgcgcaagtat
cttgcgcggttcgggctggattgggagggggtgcggctggcgctcgaagcggcacggtga
DBGET
integrated database retrieval system
