KEGG   Burkholderia sp. JP2-270: DM992_31560
Entry
DM992_31560       CDS       T07766                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
burk  Burkholderia sp. JP2-270
Pathway
burk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:burk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DM992_31560 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:burk02044]
    DM992_31560 (icmF)
Secretion system [BR:burk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DM992_31560 (icmF)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: AWV03732
UniProt: A0A2U9SX15
LinkDB
Position
2:2964477..2968544
AA seq 1355 aa
MKKYLPFFVSRAFLAFLAMIVVALVIWFVGPFFAFGGLKPLAAAGVRVLLIVLLLVGVLL
WLAGKPTSIVFVTLSCLLIWYAAPLLSFGHASPFEPVSTRLVAIALVVGVFVLFWAVRIW
RKMQEDEAFLKKVLHFGGKKVDSPAAPRLKKVEAIVAAALVRLKSMRTGSRGLGKLFQGK
RYLYELPWYVTLGSSSAGKTSMLLNGGLAFPIAEQMQRAAGKPTDEAAAVDWWLTNDAVL
IDTVGYYTRHGTSKVADADVPAEPAGKSTAEVRGDDEPAESHEDGGAETSSISPAATSKS
SANAASIRGDTRGWHEALDRGEWLGFLGMLRRHRPRAPINGVLLVVDVATLARADEQKRI
AEAAALRARLDELRSELGIRFPVYVLVTKMDRLTGFVEYFSDLTTESRAQTWGVTLPYGK
DAIEKSGLHVRYRDELMQLSGRLSDMIHSRLQDEDETIKRRRLAALPEEFSALIAPLVDL
IDRVFLDSRYDDTQLHSTLRGVYFTSAQQGGSPVVAERDTVVQRLAPKHGQEGAADGHEG
NRSLFLHDVLTRVVFPEAHLVSPNLRWEYRYRLLRLIGHALALLLFVWLALGLRVSFGNN
SDYLDAIGRKVQALAARVTQQYKVPKPETVPDTLTEAHYLPAFPNLDLSDPGSTWRYGLY
TPPNIVTESGRTYDALEDNLLVPQIVRRMEDVMSGAITNKDPKAAYDALRVYLMLYDTAK
FNAADVKAWVLDDWAKNDSAAIFGGRASMIDHVQQLLSGDRVVKSPLIRNDALIQQARAF
LDGSNATDRLYQRAKAAMLKEAPDEFTLLRAVGPQAGTVFTRASDQPLSRGVPGLFTFDG
YRNLFDKRLAEFVQIARDDDAWVMGRSYLGEAQKKTAEIVSNATGVDDALTDAVRREYLM
EYAQQWDTFLNDIRTVSGTSLAFNLQVLRSFAAPDSPLARLARAAVHETTLTAVATGSDG
SFLQKAADQLNQKADKVLGIRASERVERELVDDHFAALREVVTGNADSQAGPQAAAAQAG
RTGLDSVANLVNDYYTALTVSDNALSNNSMPPATDTGAKLKMTANTMPAPFRAVLLQLAA
DGSQEVNHGIGQLLSRQMQAVVGDACRLSIEGNYPFSPDSKRDVSIDDFTRVFAQGGVID
DFFTKTLAPFVDTAAKPWRYRTLPGATESVQGPDLEPFEHAKAIRDVFFNDPGHKQLTWK
ADIRIPELDPTITSLSLDIDGQSSLYQHGPVAPFTVSWPGPRGGVHTEITASPRIRPDTS
TIVADGPWALMRLLRKGQVVETATPGRTRVAFDFDGRKAVLDVANTGSVANPLTSDVLKT
FRCPTSMPVFNLSDSGPPPGLPRGAMPMSPAGVSQ
NT seq 4068 nt   +upstreamnt  +downstreamnt
atgaaaaagtatctgccgttttttgtatcgcgcgcgtttctcgcgttcctcgcgatgatc
gtcgttgcgctggtgatctggttcgtcggtccgttcttcgcattcggcggcctcaagccg
cttgccgcagccggcgtgcgcgtgctgctgatcgttctgttgctcgtcggcgtattgctt
tggcttgcaggcaagccgacgagcatcgtgttcgttacgttgtcgtgcctgctgatctgg
tatgcggcgccgctgttgtcgttcggccatgcgtcaccgttcgagcctgtgtcgacgcga
ctcgtcgcgatcgcgctggtggtcggcgtctttgtccttttctgggcggtccggatctgg
cgcaagatgcaagaggacgaggctttcctgaagaaggtgcttcatttcggcgggaagaag
gtggattcgccggctgcaccgcggttgaaaaaggtcgaagcaatcgtcgcggccgcgctg
gtacggttgaagtcgatgcgcactggctcgcgcgggctgggcaagttgtttcagggcaag
cgctatctctatgaactgccctggtacgtcacgctaggctcgagcagtgcgggtaagacg
agcatgctgctcaatggcgggctggcgtttccgatcgccgagcagatgcagcgtgcagcc
ggaaaaccgacggacgaagcggctgccgtcgactggtggctcacgaatgatgccgtgctg
atcgacacggttggttactacacgcgtcatggaacttcgaaggttgcggatgctgacgtc
ccggctgaaccagcgggaaagtcgactgccgaggtgcgtggtgacgacgagccagcagaa
tcgcatgaggacggtggggctgagacatcctccatttccccggccgccacatcgaagtcg
agcgcgaatgccgcttcgattcgcggagatacgagagggtggcacgaagcactcgaccgc
ggggaatggctgggttttctcggaatgttgcgccgacatcggcctcgtgccccgatcaat
ggggtattgctcgtggtcgacgttgccacgctggcgagggcagatgaacagaaacgcatc
gccgaagcggccgcgctgcgcgcgcgtctcgatgaactgcgcagtgagctgggaattcgc
tttcctgtctacgtactcgtcacgaagatggatcgtctgacgggatttgtagagtatttc
agcgatctgacgacggagagtcgtgcgcagacctggggggtaacgttgccgtatggcaag
gatgccattgagaagtcgggtttgcatgtgcgctaccgagatgaactgatgcagttgtca
ggacgactgtccgatatgatccattcgcgccttcaggatgaagacgaaactatcaaacgt
cgtcggcttgctgcgcttccggaagagttctccgcactgatcgctccgctcgtcgacctg
atcgaccgcgtatttctcgattcccgatacgacgacacccagcttcattcgacgctgcgc
ggcgtctatttcacgagcgcgcagcaaggcgggagcccggtcgtcgcggaacgcgacacg
gtcgtgcaacgtcttgcaccgaagcatgggcaggagggcgccgccgatgggcatgaaggc
aaccggagtcttttcctgcacgacgtcctgactcgcgtcgtgttcccggaagcgcatctc
gtcagtcccaacctgcgctgggagtaccggtaccggttgctgcgcctgatcggacatgcg
ctcgccttgctgctgttcgtctggctcgcgctcggtctgcgcgtgagttttggcaacaac
agcgactatctcgacgccatcggccgcaaggttcaggcattggcggcccgcgtgacgcag
cagtacaaggtgcccaagccggagaccgtacccgacacgctgaccgaagcgcactatttg
ccggcgtttccgaatctggacctgtccgatcccggtagcacatggcgctacggcctctat
accccaccgaacatcgtgacggagagcggtcgcacctacgatgcactggaggacaacctg
ctggtgccgcagatcgtgcgccggatggaagacgtgatgtccggggcgattaccaacaag
gatccgaaggccgcctacgatgcgctgcgcgtctacttgatgctttacgacaccgcgaaa
ttcaatgccgccgacgtcaaggcgtgggtgctcgacgactgggcgaaaaacgacagcgcg
gcgatttttggcggccgcgcgtcgatgatcgatcacgtgcagcagctgctttccggcgat
cgcgtcgtgaagtcgccgttgattcgtaacgacgcactgatccagcaggcccgggcgttc
ctcgacggcagcaacgcgacggaccgtctgtaccagcgtgcgaaggcggcgatgctgaag
gaggcgccggacgagttcacgctgctgcgcgccgtcgggccgcaagccggcaccgtgttc
acgcgggcgagcgaccagccgctctcgcgcggcgtgccgggtctctttacgttcgatggc
taccggaacctgttcgacaagcggctagcggaattcgtccagatcgcgcgcgacgacgat
gcgtgggtgatgggtcgctcgtatctgggggaggctcaaaaaaaaacggctgagatcgtg
agcaacgcgaccggggtggacgatgcgctgacggatgctgtccgtcgcgagtacctgatg
gaatacgcgcaacagtgggatacgtttctcaacgacatccggacggtgagcggcacgagc
ctggcattcaatctccaggtgctgcgcagcttcgccgcccccgactcgccgcttgcgcga
ctcgcccgcgcggccgtgcatgagacgacgctcacggcggtggcgaccggatcggatggt
tccttccttcagaaggcggccgaccagctcaaccagaaggccgacaaggtgctcggcatc
cgcgcatcggaacgcgtcgaacgcgaactcgtcgacgaccatttcgcagcgctgcgcgag
gtcgtgacgggcaacgccgactcgcaggccggtccccaggcggcggccgcgcaggccgga
aggacgggcctcgacagtgtggccaacctggtgaacgattactacacggcgcttacggtt
tccgacaacgcattgtcgaacaacagcatgccgccggcgaccgacaccggggcgaagctc
aagatgacggccaacacgatgccggcgcctttccgggccgtgctgctgcagcttgccgcg
gacggttctcaggaggtcaaccacggtatcggccaactgctgtcccgacagatgcaggcg
gtcgttggcgacgcgtgtcggctctccatcgagggcaactatccgttctcgcccgacagc
aagcgcgacgtcagcatcgacgacttcactcgcgtgttcgcgcaaggcggcgtgatcgac
gatttcttcacgaagacgcttgcgcccttcgtcgacacggccgcgaagccgtggcgctac
cgtacgctgcccggcgcgacagaatctgtccaggggcccgatctggagccgttcgagcat
gcgaaggcgattcgtgacgtcttcttcaatgatccaggtcacaagcagcttacgtggaag
gccgatatccgtattcccgaactggatcccacgatcacaagcctgtcgctcgacatcgac
ggccagagctcgctctatcagcatggcccagtggcaccgttcacggtgtcgtggccgggg
ccgcgcggtggcgtccacacggagattaccgccagccctcgcattcgcccggatacgtcg
acgatcgtggccgacggaccgtgggcgctgatgcggttgcttcggaaggggcaggttgtc
gagacggccacgcccggccgtacccgagttgcgtttgacttcgatggtcgcaaagcggtg
cttgacgttgcgaatacgggaagcgtggcgaatccattgacgagcgatgtgctgaagaca
ttccgctgcccgacctcgatgccggtgttcaacctgtccgatagcggaccgccccctgga
ttgccgcgcggcgcgatgccgatgagcccggcaggcgtctcccaatga

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