Burkholderia sp. MS389: GJG85_02205
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Entry
GJG85_02205 CDS
T10544
Name
(GenBank) DEAD/DEAH box helicase
Organism
burm Burkholderia sp. MS389
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Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QRR14983
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Position
1:complement(463804..467409)
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AA seq
1201 aa
AA seq
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MADAVILGVARAVREERAGPALLAAHAKLYSQQLRRDMSRPGLVSFSQADAELLLDEAML
LVECGLVEREEAPSSNWRASLQRAAQIAEWLSQEDIRPAGSPLHLIAAAIYQVADLPAMA
LGHLRRIPVTEHGSEILRNFLSGDFPGALVAVGRYWQDEYDVDPPHPDGSQLGTDLELSR
LSEQHVVKCIGTVCAYLRTGGHVPIERALAKLDRLAHVFLHSRDSYSFLLARLVAACARR
FSETCLWPHVERLRAGTSERTGQALVQFARAAFLNRRALVWPAQENGIRRLQEAGSFVLC
TPTGSGKTTIATLGIVQGLFEERDNPLSLAGIGPGNLILYLVPSRALAAEVEHRLSEDLK
GIDASPVVVTGLYGGVDWGPTDAWIQSDAPAIVICTFEKADALIRYLGILFLDRVRLVVI
DEAHMVELDPTKAAELAGGTSRALRLEQLGMRLLRAQDTHGFRIIALSAVAAHAAPAIAR
WLGGNPGARPITSTHRSTRQMVGKLEISPRGALSIHYDLMDGQSLRFGDGASEDTPYVPA
PFGPIPGGMPDDGPEVRMRAPTLWAALNLAGQRSDGLRPAVLISITQNVGAFAKTCADLM
DQWESEVLPAYSAIDENDEAWKKCLASAADYFTDRSVEYRLLEHGIAVHHGQLPPLFARR
LKVIIDRGLVRVIIATSTLSEGVNIPVNAVLIPSLFRGTARMTVQEFTNLIGRAGRPGVS
TEGAALVVLPEAERMRSGRELWNRQRQAYDSLVKEMLIAGASDAPADGEPPTVGANSPLQ
ILLDALREAWERLDGNGAFDEWLARAAVIGEEAKHTADGLLDLLDPLDAILIAALQEVAQ
LKTTELEPAEIEIELSRIWRYTYAAAAATSEEALKQRWLTRGLAINRLYPDAAQRRRIYK
TSLTPRSATVLLRIADELRGLLQSAGDYARRSREAQLQFVGEILESLSAVPAFEIEPRLK
KNVDWRLVLQWWLAAGTLSPKQRPHADDSPKWFKFANDNFIYRGSWGLGGLISLLMDSVD
GGGPVRALEIDDWPRSGLPWIAFWLKELVNWGTLDPVVAFLLARGNSVDRQKAEAEAKLY
YEERSTVVDANDLLDPREIRDWVRGRRATSEPAGTRADITVPAELVRPADHFLVENVSVS
PLPSVDGLSWLDPAGHVVAKSEKPEKWVDSPNDYDFDLQVKTAMIVGSAYLPHRLHDQEP
S
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcggtaatacttggagttgctcgagcggtccgcgaagagagagccggtccg
gctcttctggctgcgcatgccaagctatatagccagcagctccggcgcgacatgtccagg
cctggcctcgtgagtttctcgcaggccgacgcggaactactgcttgacgaggcgatgcta
ctagtcgagtgtggtctggtcgagcgagaggaagcgccgagttcgaactggcgggcatcg
ctgcagcgagccgctcaaatcgccgagtggctgtcccaggaggacatcagacccgcggga
tcgccgctacacctgatcgccgctgcaatctatcaggtggcagatcttccggcgatggca
ctcggacacttgcgccgaatacccgtcaccgagcatggctctgagatcctgaggaatttc
ctctctggtgacttccccggtgccttggtggccgttggacgctactggcaagacgaatat
gatgtcgatccgccgcatcccgatggttcgcagttggggaccgatttggaactgagccgg
ctctccgagcaacatgtcgtgaaatgcatcggcaccgtctgcgcgtacctgcgaactgga
ggtcacgtgcctattgagcgcgccttggcgaagctcgaccgtctcgctcacgtctttctt
catagccgcgattcctactctttcctactggcgcgcctcgtcgcagcttgtgcgcgccga
ttctcggagacttgcctgtggcctcacgtggagcgactgcgcgcgggtacgtcggagcgg
actggccaagcgctcgtgcagtttgctcgggccgctttcctaaatcggcgcgcacttgtg
tggcccgcgcaggagaacggaatcagacggctgcaggaagcagggtcattcgttctctgc
acgccaactggctccggcaagaccacgatcgcaaccttgggtatcgtacaaggccttttt
gaggaacgagacaatcctctatcgctcgcgggcattggtcctgggaatctgatcctgtac
ctcgtcccttcccgtgcgttggcagccgaggtggagcataggttatcggaagacctaaag
ggtatcgatgcaagcccggtggtggtaactggcttgtatggaggcgtggattgggggccg
acggacgcctggattcaatccgatgccccggcgattgttatctgcacattcgagaaggca
gatgctctgatccgctatctcggaatcctttttctcgaccgcgtgcggcttgttgtgatc
gatgaggcgcatatggtcgaacttgatccgacaaaggcagccgagctggccggcggcacg
tcacgcgcgctccgtctcgaacagttgggaatgcgcctactccgcgcacaggacacgcac
ggtttcaggattattgctctctcggcggtcgctgctcatgccgcgccagcaattgcgcgt
tggctcggaggcaacccgggcgctcgcccgatcacatccacccatcgtagtactcgtcaa
atggtcggcaagctcgagatttcgcctcgaggtgccctctccattcactatgacctgatg
gacgggcaaagccttcgcttcggtgatggcgcgagcgaggacacgccgtacgtccctgcc
cccttcgggccaatcccaggggggatgcccgatgacggtcccgaggttcgcatgcgtgcg
ccgacgctgtgggcggcgctcaaccttgcagggcagcgtagcgatggactacgtcctgcc
gtgctcatctccatcacccagaatgtcggtgcgttcgccaagacctgtgccgacctcatg
gatcagtgggagagcgaggtgctccccgcctacagtgcgatcgacgagaacgacgaggct
tggaagaaatgccttgcgagcgcggccgactacttcaccgaccgctcggttgagtaccga
ttgctggaacacggaatcgccgtccatcacggtcagcttccaccgctgtttgcgcgcagg
ctcaaagtgatcattgatcgcggcttggtgcgggtcatcatcgccacatccaccttgtcc
gaaggcgtcaacatccccgttaacgctgtcctaattccaagcctctttcgtggcaccgct
cgcatgacggtccaagagttcacgaacctcatcgggcgcgctggccgcccgggcgtctct
acagagggtgccgcactggtagtgttacctgaggccgaacgaatgcggtccggtagagag
ctatggaacagacagcgccaagcatacgactcacttgtaaaagagatgctaatagccggt
gcaagcgacgcacccgcggacggagaacctccaacggtaggcgctaacagcccgctgcag
atcctattagatgcgttgcgggaagcgtgggagaggctggacggaaacggagccttcgat
gagtggctcgcccgtgcagcagtaattggcgaagaagccaagcacacggccgacggttta
ctcgacttgctcgatcccttggatgcaatccttatcgccgcgcttcaagaggtcgcacag
ttaaagacgacagagcttgagccggccgaaattgaaatcgaactttctcgcatctggagg
tacacgtacgcggcagccgccgccacgagcgaggaggcactcaaacagcgctggcttacg
cgagggctcgccattaacagactgtatcccgatgcggcgcaacgtcgaagaatatacaaa
acgagtctcacgccccgttcggcaacggtgctactccgcatcgccgacgagcttcgcgga
ttgcttcagtccgccggagactacgcacgacgcagtagggaagcacagttgcagtttgtt
ggggagattctcgaatccctctccgctgtaccggcgttcgagatcgagccacggcttaag
aagaatgtagattggcggcttgtcctccagtggtggctcgcagctggaacactatctccg
aagcaacgaccgcatgcagacgacagtccgaagtggttcaagtttgccaacgacaacttc
atctaccgcggtagctggggactcggcggcctgatcagtctgctgatggacagtgtcgac
ggcggtggcccggtacgtgcgttggagatcgacgactggcccagaagcgggcttccatgg
atcgcgttctggctgaaagagttggtgaattggggcactctggatcctgtcgtcgcattt
ctgttggcgaggggcaactccgtggaccgacagaaggccgaagccgaagcaaagctttac
tacgaggagagatcgaccgtggtagacgcgaacgaccttctcgatccgagggaaattcgg
gattgggtccggggccgtcgcgccacatcggaaccggcgggcacgcgagctgacatcact
gtaccagccgaactcgtacgtcctgcagatcacttcttagtggagaacgtctcggtttcc
ccactgccgtcggtcgatgggctttcgtggctagatcccgcaggccacgtcgtcgcgaaa
tctgaaaaacccgaaaaatgggtagatagtccgaacgactacgacttcgacctacaggtg
aagaccgctatgatcgtgggctcagcttacctgccgcatcggctgcatgatcaagaaccg
tcataa
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