Burkholderia sp. MS389: GJG85_04345
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Entry
GJG85_04345 CDS
T10544
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
burm Burkholderia sp. MS389
Pathway
burm00521
Streptomycin biosynthesis
burm00523
Polyketide sugar unit biosynthesis
burm00525
Acarbose and validamycin biosynthesis
burm00541
Biosynthesis of various nucleotide sugars
burm01100
Metabolic pathways
burm01110
Biosynthesis of secondary metabolites
burm01250
Biosynthesis of nucleotide sugars
Module
burm_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
burm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GJG85_04345 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GJG85_04345 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GJG85_04345 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GJG85_04345 (rfbB)
00525 Acarbose and validamycin biosynthesis
GJG85_04345 (rfbB)
Enzymes [BR:
burm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GJG85_04345 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
QRR12672
UniProt:
A0AAP9ZUX3
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All DBs
Position
1:928888..929949
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AA seq
353 aa
AA seq
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MILVTGGAGFIGANFVLDWLRESDEAVLNVDKLTYAGNLRTLQSLDGNPKHVFARVDICD
RTALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEATRQYWNGLSDA
DKAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPT
LTTNCSNNYGPYQFPEKLIPLMIANALAGKPLPVYGDGQNVRDWLYVGDHCSAIREVLAR
GVPGETYNVGGWNEKKNLEVVHTLCDLLDKARPKAAGSYRDQITYVTDRPGHDRRYAIDA
RKLERELGWKPAETFETGLAKTVDWYLDNQVWADEVASGEYRKWVETNYAKRA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggttacgggcggcgcgggttttatcggtgccaactttgttctcgactggctg
cgtgaatccgacgaagccgtgctcaacgtcgacaagctcacgtatgcgggcaacctccgc
acgctgcagtcgctggacggcaaccccaagcacgtgttcgcacgcgtcgatatttgcgac
cgcacggcgcttgatgcgttgtttgccgagcacaagccacgcgcagtgttgcactttgct
gccgaaagccacgtcgaccgctcgatccacggccctgctgatttcgtgcagaccaacgtc
gtcggcacattcaccctcctcgaagcgacccgtcaatactggaacggcctgagcgacgca
gacaaagcagcgttccgtttcctgcacgtttcgaccgacgaagttttcggttcgctgtcc
gcgacggatccgcaattctccgaaacgacgccgtatgcaccgaacagcccgtattcggcg
acgaaggccggctcggaccacctcgtgcgtgcctaccatcatacgtatggcctgccgacg
ctgacgacgaactgttcgaataattacggcccgtatcagttccccgagaagctgattccg
ttgatgatcgcgaatgcgctcgccggcaagccgctgccggtgtatggcgacgggcagaac
gtgcgcgactggttgtatgtcggcgaccactgcagcgcgatccgtgaggtgctcgcgcgc
ggcgtgcccggcgagacgtacaacgtcggcggctggaacgagaagaagaacctcgaagtc
gtgcatacgctgtgcgatttgctcgacaaggcgcgtcccaaggcagcaggttcgtatcgc
gaccagatcacctacgtgacggaccggcccggccacgatcgccgctacgcgatcgatgca
cgcaagctcgagcgcgaactcggctggaagccggcggaaacgttcgagacgggtcttgcc
aagactgtcgactggtatctcgacaaccaggtatgggccgacgaagtcgcgtcgggcgaa
taccgcaagtgggtcgaaaccaactacgcgaagcgcgcttga
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