Burkholderia sp. MS389: GJG85_04355
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Entry
GJG85_04355 CDS
T10544
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
burm Burkholderia sp. MS389
Pathway
burm00521
Streptomycin biosynthesis
burm00523
Polyketide sugar unit biosynthesis
burm00541
Biosynthesis of various nucleotide sugars
burm01100
Metabolic pathways
burm01110
Biosynthesis of secondary metabolites
burm01250
Biosynthesis of nucleotide sugars
Module
burm_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
burm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GJG85_04355 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GJG85_04355 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GJG85_04355 (rfbC)
Enzymes [BR:
burm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GJG85_04355 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QRR12674
UniProt:
A0AAP9ZUM9
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All DBs
Position
1:930839..931390
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AA seq
183 aa
AA seq
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MGIEVKATAIPDVKLIVPRVFGDARGFFLESFNAREFSEKLGVDAPFVQDNHSRSTKGVL
RGLHYQIQHPQGKLVRVVNGEVFDVAVDIRKSSPTFGKWVGAVLSASNFHQFWIPPGFAH
GFVVLSETADFQYKTTDYWYPEHERSIAWNDPEIGIEWPIDFQPTLAAKDVAGQRLSEAD
VFA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcgaagtaaaggcgacagcgattccagacgtcaaattgatcgttccccgtgta
ttcggggacgcgcgcggatttttccttgagagctttaatgcgcgtgaattctccgagaag
ctcggtgtcgatgcaccgttcgttcaggacaatcactcgcgctcgaccaagggagtgctg
cgtggtctgcactatcaaattcagcatccacagggcaagctcgtgcgggttgtgaatggg
gaagtgttcgatgttgctgtagacattaggaaaagttcacccaccttcggaaaatgggtg
ggggcggtcctgagtgcatcgaattttcaccaattttggattccgcccggttttgcacac
ggatttgttgtgttatcagaaacggcggattttcagtacaagaccacggattactggtac
ccggagcatgagcggagcattgcgtggaatgatccggaaatcggcattgagtggcccatc
gattttcagccaacgctggcggcgaaagatgtggcaggtcagcgtctgagcgaagcggat
gtcttcgcgtga
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