Burkholderia sp. MS389: GJG85_05350
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Entry
GJG85_05350 CDS
T10544
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
burm Burkholderia sp. MS389
Pathway
burm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
burm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GJG85_05350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
burm03019
]
GJG85_05350
03009 Ribosome biogenesis [BR:
burm03009
]
GJG85_05350
Messenger RNA biogenesis [BR:
burm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GJG85_05350
Ribosome biogenesis [BR:
burm03009
]
Eukaryotic type
Pre-60S particles
RNases
GJG85_05350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QRR12858
LinkDB
All DBs
Position
1:1129456..1130076
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AA seq
206 aa
AA seq
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MTDTAASASQPALVRNELNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDVAVEGPVFAI
HQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEAEAAAQLQAFLAQYVSPGKSPMCGNS
ICQDRRFMARWMPEFERFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESI
DELKYYREHFLIPAASAPAGDSVPAA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgccgcttccgccagccagcccgcgctcgtgcgcaacgagttgaacctc
gtctggctcgacatggagatgacgggcctcgacccggataacgaccgcatcatcgagatc
gcggtcgtcgtgaccaattccacgctcgacgtcgccgtcgagggcccggtgttcgcgatt
caccagagcgacgagacgctcgcgaagatggacgactggaacaagtcgacgcacggccgc
tcggggctgatcgaccgcgtgcgcgcgtcgaccgtgaccgaggcggaagccgccgcgcaa
ctgcaggcgttcctcgcgcagtacgtgtccccgggcaagtcgccgatgtgcggcaactcg
atttgccaggaccgccgcttcatggcgcgctggatgccggaattcgagcggttcttccac
taccgcaacctcgacgtcagcacgctcaaggagctgtgccgccgctggcagccggccatc
tacaaaggtttccagaagcgggcgatgcacaccgcgctcgccgacatccacgagtcgatc
gacgagctgaagtactaccgcgagcatttcctgattccggccgcatcggcgccggcaggc
gattccgtgccggccgcctga
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