Burkholderia sp. MS389: GJG85_06045
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Entry
GJG85_06045 CDS
T10544
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
burm Burkholderia sp. MS389
Pathway
burm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
burm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GJG85_06045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
burm03400
]
GJG85_06045
Enzymes [BR:
burm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GJG85_06045
DNA repair and recombination proteins [BR:
burm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GJG85_06045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
Helicase_RecD
SLFN-g3_helicase
DEAD
RecD_N
AAA_22
AAA_25
MukB
ATPase
CbiA
Motif
Other DBs
NCBI-ProteinID:
QRR12989
UniProt:
A0AAP9ZVA8
LinkDB
All DBs
Position
1:1282876..1285203
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AA seq
775 aa
AA seq
DB search
MTASDDMLEFTGGLVARLPEPADFGIALAEGFARRIGDLARRAGAPSASARWAARAAFAT
SRATAGGHVCVALGALAQRYEAPLDEVRAALAASGVVAFGTLARGDERPLIVDRLDHLYL
SRYFDYERRLADALVAQAGVAAPDEGLSPDRLRDSLARYFGPATGEVDWQRAAAIVALTG
RVTIVSGGPGTGKTTTVVGVLACLLDAHPGLRIALAAPTGKAAQRMQEALHARAGDLPPE
LAARLPDTSYTLHRLLGGGGAAGFRHHRDNPLPYDLIVVDEASMIDVALAAHLLDALAPG
ARLVLLGDKDQLAAVEAGAVFAELSARPAFTAAARTRIAHALGIDEAAFVAALPMPDEAA
PAAAISAAHPVPASARAPASPSASAPVSRRSAPRSSKVDARQASLFDDEPQDDEVSSTAD
IAPPQPTESAPADAGAPDSNAPAWIEANDLAWLDAVELPPFDADDAALASAVAMAAASPL
TGEAAAASAGTPAAASAPLADCVVWLERNYRFGLDSPIGRLSLAIRRGDVQAALDALPAD
DSAAASFHDDAGDTLASSTVERLARRFGAYLDALRDALAAPAPDPLPLFDALNRFRILCA
TRSGSRGAEHVNALVAAHMRHAARVPLAVGAHWFTGRPIMVTRNDYALGLFNGDIGIALP
DAHGVLRVWFRRADGSARAVSPAALPPHETAFALTVHKSQGSEFDEAALVLPASFGRVLT
RELVYTAVTRARTRVQVIGPRRVLAQAVATRTQRDSGLAARVDEALARRRMEASR
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgtccgacgacatgctcgaattcaccggcggcctcgtcgcgcggctgcccgag
ccggccgatttcggcatcgcgctcgcggagggctttgcgcgccgcatcggcgacctcgcg
cggcgagccggtgcgccgtccgcgtcggcgcgctgggcggcgcgcgccgcgttcgcgacg
agccgcgcgaccgccggcggccacgtgtgcgtcgcgcttggcgcgctcgcgcagcgctac
gaagcaccgctcgacgaagtgcgcgccgcgctcgccgcgagcggcgtggtcgcgttcggc
acgctcgcgcgcggcgacgagcggccgctgatcgtcgatcggctcgatcacctgtacctg
tcgcgctatttcgattacgaacggcggctcgccgatgcgctcgtcgcgcaggccggtgtc
gccgcgccggacgaaggcctgtcgcccgaccgcttgcgcgacagtctcgcccgttacttc
gggccggctacgggcgaagtcgactggcagcgcgcggcggcgatcgtcgcgctgacgggc
cgcgtgacgatcgtcagcggcgggccgggcacgggcaagacgacgaccgtcgtcggcgtg
ctggcctgtctgctcgacgcccatccggggctgcgcatcgcgctggccgcaccgaccggc
aaggccgcgcagcggatgcaggaggcgctgcacgcgcgcgccggcgatctgccgcccgag
ctcgcggcgcgcctgcccgacacgtcgtacacgctgcatcggctgctgggcggcggcggg
gcggccggtttccggcatcatcgcgacaatcctctgccgtacgatctgatcgtcgtcgat
gaggcgtcgatgatcgacgtcgcgctcgccgcgcatctgctcgacgcgctcgcgccgggc
gcgcggctcgtgttgctgggcgacaaggatcaactggccgcggtcgaggccggcgccgtg
ttcgcggagctgagcgcgcggccggcgttcaccgccgcggcgcgcacgcgcatcgcgcac
gcgctgggtatcgacgaggcggcgttcgtcgcggcgttgccgatgccggacgaagctgcg
ccggcggcggcgatttcggccgcgcatccggttcctgcttccgcacgtgctccggcgtcg
ccatcggcgtctgctcccgtttcacgcagatcggcgcctcggtcgtcgaaagtcgatgcg
cgacaggcgtcgctcttcgacgacgaaccgcaggatgacgaagtgtcgtcgacggccgac
atcgcgccgccacagcccaccgagtcggcaccggccgatgccggcgcaccagacagcaat
gcgccggcctggatcgaggccaacgacctcgcatggctcgacgccgtcgagctaccgccg
ttcgacgcggacgacgcggcacttgcatcggcagtggcgatggcagccgcatcgccattg
accggcgaagccgctgccgcgtccgccggcacgcccgcagcggcgtcggcgccgctcgcg
gactgcgtcgtgtggctcgaacgcaattaccgcttcgggctcgattcgccgatcgggcgg
ctgtcgctcgcgatccgccgcggcgacgtgcaggcggcgctcgatgcgctgcccgccgac
gactcggcagccgcatcgtttcacgacgatgcgggcgacacgctggcgtcatcgacggtc
gagcggctcgcacggcgcttcggcgcctacctcgacgcgttgcgcgacgcgctggccgcg
ccggcgcccgatccgctgccgctgttcgacgcgctcaaccggttccggatcctgtgcgcg
acccgcagcggttcgcgcggcgcggaacacgtcaatgcgctggtggccgcgcacatgcgg
catgcagcgcgcgtgccgctcgcggtcggcgcgcactggttcaccgggcggccgatcatg
gtcacgcgcaacgactatgcgctggggctgttcaacggcgacatcggcattgcgctgccc
gacgcgcacggcgtgctgcgcgtgtggttccggcgcgcggacggctccgcgcgcgcggtg
tcgccggctgcgctgccgccgcacgaaacggcgttcgcgctgacggtgcacaagtcgcag
ggctcggaattcgacgaagcggcgctcgtgctgcccgcgtcgttcggccgggtgctgacg
cgcgagctcgtttatacggccgtcacgcgcgcgcgcacgcgcgtgcaggtgatcgggccg
cggcgcgtgctggcgcaggcggtcgcgacgcgcacgcagcgcgattcggggctcgctgcc
cgcgtcgacgaggcgctcgcgcggcgccgcatggaggcttcgcgatga
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