Burkholderia sp. MS389: GJG85_09380
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Entry
GJG85_09380 CDS
T10544
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
burm Burkholderia sp. MS389
Brite
KEGG Orthology (KO) [BR:
burm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
burm03021
]
GJG85_09380 (rpoS)
Transcription machinery [BR:
burm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GJG85_09380 (rpoS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_20
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QRR13608
UniProt:
A0AAQ0CRI4
LinkDB
All DBs
Position
1:complement(2037273..2038361)
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AA seq
362 aa
AA seq
DB search
MPKSKRHEPQAESEKISRATQASVGRVGASTDDEDDVAENERDLEARDADTDGGDDEREG
RQEAAPDVDDFRTLLQAELTADTIQHYLNRISVKPLLTVEEEQRYSRLAKAGEFEARQVM
IERNLRLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEKFDPTRGFRFSTYATWWIRQSI
ERAIMNQARTVRLPVHVIRELNQVLRAKRHLEKNSMSTGEAAERREASIDDIAYLTGKTA
EEVTDILALNEHTASLDAPLDLDPASSLLDLLPDDQSQSPDAEVQHRELETLTRAWLSRL
SDKHRHVIERRFGLNHIEPATLEELADEMGLTRERVRQIQQEALVRLKRFFASNGVRKDA
VL
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaatcgaagcgccacgagccgcaagccgagtctgagaagatcagtcgtgccacg
caagcatcggtggggcgagtaggtgcttcgacggacgacgaggacgacgtcgcggaaaac
gaacgcgatctcgaggcgcgcgacgccgacacggacggcggcgacgacgagcgcgaaggc
cgccaggaagccgcgcccgacgtcgacgatttccgcacgctgctgcaggccgagctcacg
gccgacacgatccagcattacctgaaccgcatcagcgtgaagccgctgctgaccgtcgag
gaagagcagcgctattctcgtctggcgaaggccggcgaattcgaggcgcggcaggtgatg
atcgagcgcaatctgcgtctcgtcgtcagtatcgcgaaggggtacctgaaccgcggcgtg
ccgctgctcgacctgatcgaggaaggcaatctcggcctgatgcacgcgatcgagaaattc
gacccgacgcgcggtttccgcttctcgacctacgcgacgtggtggatccggcagagcatc
gagcgggcgatcatgaaccaggcccgcacggtgcgcctgcccgtgcacgtgatccgcgaa
ctgaaccaggtgctgcgcgcgaagcgccatctcgaaaagaattcgatgtcgacgggcgag
gcggccgagcgccgcgaagccagcatcgacgacatcgcctatctcaccggcaagaccgcc
gaggaagtcaccgatatcctcgcgctcaacgaacacacggcgtcgctcgacgcgccgctc
gatcttgatcccgcgagcagcctgctcgacctgctgcccgacgaccagagccagtcgccc
gacgccgaagtgcagcaccgcgagctcgaaacgctgacgcgcgcgtggctgtcgcggctg
tccgacaagcaccggcatgtgatcgagcgccgcttcggcctgaaccacatcgaaccggcg
acgctcgaggagctcgccgacgagatggggctcacgcgcgagcgcgtgcggcagatccag
caggaggcgctggtgcgcctcaagcggttcttcgcctccaacggcgtgcgcaaggacgcc
gttctgtaa
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