Burkholderia sp. MS389: GJG85_16480
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Entry
GJG85_16480 CDS
T10544
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
burm Burkholderia sp. MS389
Pathway
burm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
burm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GJG85_16480 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
burm03400
]
GJG85_16480 (xth)
Enzymes [BR:
burm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
GJG85_16480 (xth)
DNA repair and recombination proteins [BR:
burm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GJG85_16480 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QRR14943
LinkDB
All DBs
Position
1:complement(3534912..3535685)
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AA seq
257 aa
AA seq
DB search
MMRVITANLNGIRSAAKKGFFDWLGEQNADCVCVQEIKVSADDLPAEFVEPHGFKSYFHH
AEKKGYSGAGVYSRREPDDVIIGFGSSEFDAEGRYVEARYGKLSVVSVYVPSGSSGEERQ
QAKYRFMAEFMPHLAALKKKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEEREWLTR
LFDDVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKSTSIFKD
IKFSDHAPLTIDYDYTK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgagtgatcaccgccaacctgaacggcatccgctccgccgcgaagaagggcttc
ttcgactggctcggcgaacagaacgccgattgcgtgtgcgtgcaggaaatcaaggtgtcg
gccgacgacctgccggccgaattcgtcgagccgcacggcttcaagagctatttccaccac
gcggagaagaagggctacagcggtgcgggcgtgtacagccgccgcgagcccgacgacgtg
atcatcggcttcggcagcagcgaattcgatgccgaagggcgctacgtcgaggcgcgctac
ggcaagctgtcggtcgtgtcggtgtacgtgccgtccggctcgagcggcgaagaacgccag
caggccaagtaccgcttcatggccgaattcatgccgcacctcgccgcgctgaagaagaag
cgcgaggtgattctgtgcggcgacgtgaacatcgtccacaaggaaatcgacatcaagaac
tggaagagcaaccagaagaactccggctgcctgccggaagagcgcgagtggctcacgagg
ctgttcgacgacgtcggctacgtcgacgtgttccgcacgctcgatcaacgccccgagcag
tacacgtggtggagcaaccgcggccaggcgtacgcgaagaacgtcgggtggcggatcgat
taccagatcgcgacgccgggcgtggccggcaccgcgaaaagcacgtcgatcttcaaggac
atcaagttcagcgaccacgcgccgctgacgatcgactacgactacacgaagtga
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