Burkholderia sp. MS389: GJG85_16890
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Entry
GJG85_16890 CDS
T10544
Symbol
speC
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
burm Burkholderia sp. MS389
Pathway
burm00330
Arginine and proline metabolism
burm00480
Glutathione metabolism
burm01100
Metabolic pathways
burm01110
Biosynthesis of secondary metabolites
burm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
burm00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
GJG85_16890 (speC)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
GJG85_16890 (speC)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
GJG85_16890 (speC)
Enzymes [BR:
burm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
GJG85_16890 (speC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
HSD_C
Motif
Other DBs
NCBI-ProteinID:
QRR15122
UniProt:
A0AAQ0CRT7
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All DBs
Position
2:complement(55974..58193)
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AA seq
739 aa
AA seq
DB search
MRLPFQVIYRRVRVSLLKIAVEPALIGAFLTTHEQVDVFQTDFTNIAAVVVGIEAAEKVL
KTVERTGFAIPFFVAVEPDQEVPPSVLPNASGVIPLRHGGRHYHGRQISAAADIYSENLL
PPFFKVMRDYVQRGYVEFDCPGHQGGQFFSNHPLGRMFFDFFGETLFRSDLCNADVRLGD
LLIHEGPALEAQRNAARIYNADKTYFVLNGTSTSNKVVTSALLAPGDLVLFDRNNHKSVH
LGALVLSGARPVYLETARNAWGLIGGVDSAALGEARIRDAIRDVAPERADLPRPFRLAVI
QLGTYDGTIYNAREIVDRIGHLCDYILFDSAWVGYEQFIPMMQDCSPLMLTLGPDDPGIF
VTQSVHKQQAGFSQTSQIHKKDSHIEGQKRFCDHRRFNNAYMIHASTSPFYPMFAALDVN
AQMHAGPAGRRLWRDCVAHGVDARKLLLKTCRQIRPFVPQQIDGRPWADYPTEQIVDDLR
FFRFHPADRWHGFEGYADDQYFVDPCKLLLTTPGIDRDTHEYAPFGAPAPILARYLREHG
VVPEKADLYTILFLLTPSESAGKLQHLVAHLAQFERHLDQDTPLREAIPSLCEAYPELYG
TMRLRQLCQRMHDFYRSHDMKHLQKQMFRRAQFPKQAMLPQAANTELIRNNVELVTLERI
EGRIATEGALPYPPGIFCVVPGEAWGGPALDYFRALEAGINALPGFEPEIQGVYLQTKLD
GTKQASAYVVAAGADASRA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcccgtttcaggtcatttaccggagagttcgcgtgagcctgttgaaaatcgca
gtcgagccggcgctgatcggcgcctttctcaccacgcacgaacaggtcgacgtattccag
accgatttcacgaacatcgcggccgtcgtcgtcggcatcgaggccgcggaaaaggtgctg
aaaaccgtcgagcgaaccggtttcgcgattccgttcttcgtcgcggtcgagcccgaccag
gaagtgccgccgtcggtcctgccgaacgcgagcggcgtgatcccgctccggcacggcggc
cgccactaccacggccggcagatttccgccgccgccgacatctacagcgagaacctgctg
ccgccgttcttcaaggtcatgcgcgactacgtgcagcgcggctacgtcgaattcgactgc
ccgggccaccagggcggccagttcttctcgaaccatccgctcggccggatgttcttcgat
ttcttcggcgagacgctgtttcgctcggatctctgcaacgcggacgtccggctcggcgat
ctgctgattcacgaagggcccgcgctggaagcccagcgcaacgccgcgcgcatctacaac
gcggataaaacttattttgtgctgaacggcacgtcgacgtcgaacaaggtcgtcacgagc
gcgctgctcgcgcccggcgatctcgtgctgttcgaccgcaacaaccacaagtcggtgcac
ctcggcgcgctcgtcctgtccggcgcgcggccggtctacctcgagaccgcgcgcaacgcg
tggggcctcatcggcggcgtcgacagcgcggcgctcggcgaagcgcgcattcgcgacgcg
atccgcgacgtcgcgcccgagcgcgccgacctgccgcgcccgttccggctcgcggtgatc
cagctcggcacctacgacggcacgatctacaacgcgcgcgaaatcgtcgaccggatcggg
catctgtgcgactacatcctgttcgattcggcatgggtcggctacgagcagttcattccg
atgatgcaggactgctcgccgctgatgctgacgctcgggcccgacgatcccggcatcttc
gtcacgcagtcggtgcacaagcagcaggccggcttctcgcagacctcgcagatccacaag
aaggacagccacatcgaagggcagaagcgcttctgcgatcaccggcgcttcaacaacgca
tacatgatccacgcgtcgacgagcccgttctatccgatgttcgcggcgctcgacgtcaac
gcgcagatgcatgcgggcccggccggccggcgcctgtggcgcgactgcgtcgcacacggc
gtcgatgcgcgcaagctgctgctgaaaacctgccgccagattcgcccgttcgttccgcag
cagatcgacggccgcccgtgggccgactacccgaccgagcagatcgtcgacgacctgcgc
ttcttccgcttccatccggccgacaggtggcacggcttcgaaggctatgcggacgaccag
tatttcgtcgatccgtgcaagctgctgctgacgacgcccggcatcgatcgcgacacgcac
gaatacgcgccgttcggcgcgccggcgccgatcctcgcgcgctacctgcgcgagcacggc
gtcgtgcccgaaaaagccgacttgtatacgatcctgttcctgctcacgccgtcggagagt
gccggcaagctgcagcatctggtcgcgcacctcgcgcagttcgagcgccatctcgaccag
gacacgccgctgcgcgaagcgattccgtcgctgtgcgaagcgtatccggagctgtacggc
acgatgcgcctgcggcagctgtgccagcgcatgcacgatttctaccgcagccacgacatg
aagcatctgcagaaacagatgttccggcgcgcgcagttcccgaagcaggcgatgctgccg
caggccgcgaataccgagctgatccgcaacaacgtcgaactcgtcacgctcgagcgcatc
gaaggccggatcgcgaccgaaggcgcgctgccctatccgcccggcatcttctgcgtggtg
cccggcgaagcatggggcggcccggcgctcgactacttccgcgcgctcgaagccgggatc
aatgcgttgccgggcttcgagccggaaatccagggcgtgtacctgcagacgaagttggac
ggcacgaaacaggcgtcggcgtacgtggtcgcggccggcgccgacgcgtcgcgggcctga
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