Burkholderia sp. MS389: GJG85_21755
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Entry
GJG85_21755 CDS
T10544
Name
(GenBank) autotransporter domain-containing protein
Organism
burm Burkholderia sp. MS389
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
QRR17556
LinkDB
All DBs
Position
2:complement(1175976..1182944)
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AA seq
2322 aa
AA seq
DB search
MTCSGVANPLAPSYSNSANNVNATVNPGASVGVLLGVGGTAMSLTGSNVTLTNNGTIDPS
ALGSGLGVLSSGTVIGNAAASTTTVTNNGTMMGSTGVAISGVTGMALSVQNGTGGTSTIT
NTGTIGSSPLVGATLVGADAPVVAAYGGGTVNMTNSGTITGRVSLGSSGTPGQGNTFTNS
GTINGGVSMGANSTNTFNAVTGSSVNTAGGTGGAFNITVGPVTLGVAATGVVDGGAGGNN
TLNLQQGVAANGTIAVNNYINFNHLDVTSGNWTINGASTAQDATLAGGTAIINDNASLGT
GTITATGGALQAGTAGLNVSNNVDLGVGGLTVQGATGLTLSGTVSGGGALTKNDGGTLTL
SGANSYTGGTNLNAGGLVIGNNSALGTGVLNVNASASLDTSTNVTLANTVNLATGSTLTL
GGSNDLGLTGTISGSGGLTKNGAATTTLTGANTYTGDTTINSGTLALSGAGSLSATGTVN
LTGAGATFDLSTAAGGRTIGALAGAAGTNVDLGANSLTLGGSVNATYAGTIGGSGSLTLS
GTGTQSLTGANTYTGGTNLNGGNLVVGSNTSLGLGAVNVNGSSTLDATTNVSLANGVNIA
TGTTLTLGGSTDLGLGGVVAGGGGLVKNGAATLTLSGANTYAGGTTLNAGGLVLGNNAAL
GTGALTVGGAATLDTSASLSVNNAIGLATGSALTLGGSNALTLSGGITGAGSLVKDGAAT
TTLTAANTYTGGTTINAGTLAIGGGGSLSATGSVNLAGAGAVLDVSGATGAQSIGALSGV
AGTNVTLGGNALTLGGTASGTFSGAIGGTGSLTLAGSGTQTLNGASTYSGGTNLNSGSLV
LGNGGALGSGALTVGGAATLDTNAALSVGNAVNLGTGAALTLGGSNSLTLGGAISGAGSL
VKDGAATTTLTGANTYTGGTTINAGTLALGAGGSLASTGTMNLAGAGAALDLSGATGGQT
LGALSGGVGTNVNLGGNALTLGGTASGTFGGVIGGTGSLTLSGTGTQTLTGTNIYTGGTN
LNSGSLVLGNGGALGSGALTVGGAATLDTNAALSVGNAVNLGTGAALTLGGSNSLTLGGA
ISGAGSLVKDGAATTTLTGANTYTGGTTINAGTLALGAGGSLASTGTMNLAGAGAALDLS
GATGGQTLGALSGVAGTNVNLGGNALTLGGTASGTFGGVIGGTGSLALSGTGTQTLTGAN
TYTGGTTIGAGSTLALGAGGSLASGSTLDLAGAGATFDLSGATAAQTLGTLTGAAGTNVN
LGGNGLTLNGNGSSTFGGAIGGTGGLTLAGSGTQTLTGANTYTGGTTIGGGGTLAVGAGG
SLASTGAVDLASAGATLNLSGATGTQTIGTLTGAAGTNVDLGTNALTLNGGTNGTFGGTI
GGTGGVTVAGTGTQTLTGANTYSGGTTINGGSTLALGAGGSLASGSALNLAGAGATFDVS
GATAAQTLGTLSGAAGTNVNLGANALTMNGSGNGTFGGAIGGTGGVTFAGTGTQTLTGAN
TYTGGTTVNGGSTLALGAGGSLASTGAVNLAGTGATFDVSGASGAQTIGALIGAAGTNVN
LGANALTLNGSGNDTFGGAIGGTGGVTFAGTGTQTLTGANTYTGGTTINGGSTLALGAGG
SLASTGAVNLAGTGATFDVSGATGAQTIGGLSGAAGTNVNLGANALALNGSGSSTFGGTI
GGSGGVTVASGTQVLTGGNTYTGGTTIAAGGTLQLGNGGTSGSVAGDVVDNGALVVNQSG
NVTIASVLSGTGSLTQAGSGQLTLTGTSTLSGPTTVSAGTLAVNGSLGQSTVTVQNGATV
TGTGTIGGLVVQGGATAAATQLGAALNVGGNVTFQPGSTFQVAATPQQSGSLAASGTATL
NGGTVQVLANQSTYQPGTTYTILSASSGVQGAFAQVSANYAFLTPTLSYDPGHVYLQLAQ
NGTALPDVATTPNQRSVATAVAALGAGNPLYDTVLTTDAPTARRAYGLLGGELQASLKSM
LLLDSRYVRDAVTDRVRQGLAPGSGPLAALSSGGAALCGDNTAGVVDPTLPPERRIGSRA
GCYGGTPYQPVVWGQAFGGRSRLGGDGNASSINRSMTGFIAGADMALNDKWRAGLAAGVT
HSSLDNDQSSSAAVNSYYVSLYGGAQYGALGVRGGASYTWYRINSDRYPGFAGFSDHDSA
GYNAHSAQVFGEVGYALPVGPVAIEPFAGLAYVNLHTDGYTETGGAAALRAGGETTHVGF
STLGVRAASQLGSIASGTFTARGTVGWRHAFGNVRPSSAFTFANGGTSFQVSGVPIARDS
AVLEAGIDANITKRLTLGLTYSGQYGSGVRDNAILGNILWKF
NT seq
6969 nt
NT seq
+upstream
nt +downstream
nt
gtgacctgttccggcgtcgcgaatccgctggcgcccagttattcgaacagcgccaacaac
gtgaacgcgacggtcaatcccggtgcaagcgtcggcgtgctgctcggtgtcggcggcacg
gcgatgtcgttgaccggcagtaacgtcacgctgaccaacaacggcacgatcgacccgtcg
gcgctcggctccgggctcggcgtgctgtcgagcggtacggtgatcggcaacgcggcggcg
agcaccaccaccgtgaccaacaacggcacgatgatgggctcgaccggcgtggcgatcagc
ggcgtgacgggcatggcgctgtcggttcaaaacggcacgggcggcacgtcgacgattacg
aacacgggtacgatcggctcctccccgctggtcggcgcgaccctcgtcggcgccgatgcg
ccggtggtcgccgcgtacggcggcggcacggtcaacatgacgaacagcgggacgatcacc
ggtcgcgtgtcgctgggttcgagcggcacaccgggacagggcaatacgttcaccaactcg
ggcacgatcaacggcggcgtgtcgatgggggcgaacagcacgaatacgttcaatgccgtg
acgggctcgtcggtcaatacggccggcggcaccggcggcgcgttcaacatcacggtcggc
ccggtcacgctcggcgtggcggcaaccggcgtcgtcgacggcggcgcgggcggcaacaat
acgctcaacctgcagcaaggcgtcgcggcgaacggcacgatcgcggtcaacaactacatc
aacttcaatcacctcgacgtcacgagcggcaactggacgatcaacggcgcatccaccgcg
caggacgcgacgctggcgggcggcaccgcgatcatcaacgacaacgcgtcgctcggcacc
ggcaccatcacggccaccggcggcgcactgcaggcaggtacggccgggctcaacgtcagc
aacaacgtggacctcggcgtgggcggcctgacggtgcagggcgcgaccgggctgacgctg
tccggcacggtgtcgggtggcggcgcgctgacgaagaacgacggcggcacgctgacgctg
tccggcgcgaacagctacacgggcggcacgaacctgaacgccggcggcctggtgatcggc
aacaattcggcgctcggcaccggcgtgctgaacgtcaacgcgtcggcgtcgctcgacacg
agcacgaacgtgacgctcgccaacacggtcaatctcgcgaccggctcgacgctgacgctc
ggcggcagcaacgatctcgggctgaccggcacgatcagcggaagcggcggcctcacgaag
aatggcgcggcaaccacgacgctgaccggcgcgaacacgtatacgggcgacacgaccatc
aacagcggcacgctcgcgctgagcggggccggcagtctgtcggcgaccggcacggtcaac
ctgaccggtgcgggcgcaacgttcgacctgagcactgcggcgggcgggcggacgatcggt
gcgctggccggcgcggccggcacgaacgtggacctcggcgccaattcgctgacgctcggc
ggcagcgtcaatgcgacctatgccggcacgatcggcgggtccggcagcttgacgctgtcg
ggtaccggcacgcaatcgctgacgggcgcgaacacgtacacgggcggcacgaacctgaac
ggcggcaacctcgtcgtcggcagcaatacgtcgctcggcctcggcgcggtgaacgtcaac
gggtcgtcgacgctcgatgcgaccaccaacgtgtcgctcgcgaacggcgtcaacatcgcg
acgggcaccacgctgacgcttggcggcagcaccgatctcggcctgggtggcgtggtcgcg
ggtggcggcggtctcgtgaagaacggcgcggcgaccttgacgctgtccggcgcgaacacc
tacgccggcggcacgacgctgaatgcaggcgggctggtgctcggcaacaatgcggcgctc
ggcacgggtgcgttgaccgtcggcggcgcggcaacgctcgatacgagcgcgagcctgtcg
gtcaacaacgcgatcggcctcgctaccggttccgcgctgacactgggcggcagcaacgcg
ctgacgctgagcggcggcatcaccggcgcgggcagtctggtgaaggacggcgcggcgacg
acgacgttgaccgccgcaaacacctacacgggcggcacgacgatcaatgccggcacgctg
gcgatcggcggaggcggcagcctgtcggcaaccggcagcgtgaacctggcaggcgcgggt
gcggtgctcgacgtgagcggcgcgaccggcgcgcagtcgatcggggcgctgtcgggtgtc
gccgggacgaacgtgacgctgggcggcaacgcgctcacgctgggcgggacggcgagcggc
acgttcagcggggcgatcggcggcaccggcagcctgacgctggccggctccggcacgcag
acgctgaacggcgcgagcacctactcgggcggcacgaacctcaatagcggcagccttgtg
ctcggcaacggcggcgcgctcggttccggcgcgctgaccgtcggcggcgcggcgacgctc
gatacgaatgccgcgttgtcggtcggcaacgcggtcaatctcggcacgggcgccgcgctg
acgctggggggcagcaacagcctcacgctgggcggggcgatttccggcgcggggagtctc
gtgaaggacggggcggcgaccacgacgctgaccggcgcgaacacctatacgggcggcacg
acgatcaacgctgggacgctggcgctcggcgcgggcggcagccttgcatcgaccggcacg
atgaaccttgccggcgcgggcgcggcactggacctgagcggtgcgacaggcggtcaaacg
ctcggcgcgctgtcgggcggcgtgggaacgaacgtcaacctgggcggcaacgcactgacg
ctcggcggcacggccagcggcacgttcggcggggtgatcggcggcacgggcagtctcacg
ttgtcgggcaccggcacgcagacgctgaccggcacaaatatctacaccggcggcacgaac
ctcaatagcggcagcctcgtgctcggcaacggcggcgcgctcggttccggcgcgctgacc
gtcggcggcgcggcgacgctcgatacgaacgccgcgttgtcggtcggcaatgcggtcaat
ctcggcacgggcgccgcgctgacgctggggggcagcaacagcctcacgctgggcggtgcg
atttccggcgcgggcagcctcgtgaaggacggggcggcgaccacgacgctgactggcgcg
aacacctatacgggcggcacgacgatcaacgcggggacgctggcgctcggcgcgggcggc
agcctggcatcgaccggcacgatgaaccttgccggcgcgggcgcggcactggacctgagc
ggcgcgacaggcggtcaaacgctcggcgcgctgtcgggcgtcgcgggaaccaacgtcaac
ctgggcggcaacgcactgacgctcggcggcacggccagtggcacgttcggcggggtgatc
ggcggcaccggcagtctcgcgttgtcgggtaccggcacgcagacgctgaccggcgcgaac
acctatacgggcggcacgacgatcggcgccggcagcacgctggcgctcggcgcgggcggc
agccttgcgtccggcagcacgctggacctcgcgggcgcgggggcgacgttcgacttgagc
ggcgcgacggccgcgcagacgctcggcacgctgaccggcgcggccggcacgaacgtgaac
ctcggcggcaacgggctgacgctgaacggcaacggcagcagcacgttcggcggcgcgatc
ggcggcaccggcggcctgacgctggccggcagcggcacgcagacgctgacgggcgcgaac
acctatacgggcggcacgacgatcggcggcggcggcacgctcgcagtcggcgcgggcggc
agcctcgcatcgaccggcgcggtggacctcgccagcgccggtgcgacgctcaatctgagc
ggcgcgaccggcacgcagacgatcggcacgctgaccggtgcggccggcacgaacgtcgac
ctcggcacgaatgcgctgacgctgaatggcggcaccaacggtacgttcggcggcacgatc
ggcgggacgggcggtgtaaccgtcgccggcacgggcacgcaaacgctgacgggcgcgaac
acgtattccggcggcacgacgatcaacggcggcagcacgctcgcactcggcgcgggcggc
agcctcgcgtcgggcagcgcgctgaacctcgcgggcgcgggcgcgacgttcgacgtgagc
ggcgcgacggccgcgcagacgctcggcacgctgagcggcgcggccggcacgaacgtgaat
ctcggcgcgaatgcgctgacgatgaacggcagcggcaacggtacgttcggcggcgcgatc
ggcgggacgggcggcgtgacgtttgctggcacgggcacgcaaacgctgacgggcgcgaac
acgtacacaggcggcacgacggtcaacggcggcagcacgctggcgctcggcgcgggcggc
agccttgcatcgaccggcgcggtgaatctcgcgggcacgggggcgacgttcgacgtgagc
ggcgcatcgggcgcgcagacgatcggcgcactgatcggcgcggccggcacgaacgtgaat
ctcggcgcgaatgcgctgacgctgaacggcagcggcaacgacacgttcggcggcgcgatc
ggcgggacgggcggcgtgacgtttgctggcacgggcacgcagacgctgacgggcgcgaac
acgtacacgggcggcacgacgatcaacggcggcagcacgctcgcactcggcgcgggcggc
agcctcgcgtcgacgggcgcggtgaatctcgcgggcacgggcgcgacgttcgacgtgagc
ggtgcgaccggcgcgcaaacgatcggcgggctgtcgggcgcggccggcacgaacgtgaat
ctcggtgcgaacgcgctggcgctgaacggcagcggcagcagcacgttcggcggcacgatc
ggcggctcgggcggcgtgacggtggcgagcggcacgcaggtgctgaccggcggcaacacg
tacacgggcggcaccacgatcgcagccggcggcacgctgcagctcggcaacggcggcacg
tcgggcagcgtggccggcgacgtcgtcgacaacggtgcgctggtcgtcaatcaatcgggc
aacgtgacgatcgcgagcgtgctgtccggcaccggctcgctgacgcaggccggcagcggg
caactgacgctgaccggcacgagcacgctgagcggcccgaccacggtcagcgcgggcacg
cttgccgtcaacggttcgctcggccagtcgaccgtcaccgtgcagaacggcgcgacggtg
acgggcaccggcacgatcggcggcctcgtggtgcagggcggcgcgacggcggccgccacg
cagctgggcgcggcgctgaacgtgggcggcaacgtcacgttccagccgggttcgacgttc
caggtcgccgccacgccgcagcaaagcggcagcctcgcggcgagcggcacggcgacgctg
aacggcggcaccgtgcaggtgcttgcgaaccagagcacctatcagccgggcacgacgtac
acgatcctcagtgcgtcgtcgggcgtgcagggcgcgttcgcccaggtgagcgcgaactat
gcgttcctgacgccgaccctcagctacgatccgggtcacgtgtatctgcaactggctcag
aacggcaccgcgctgcccgacgtcgcgacgacgccgaaccagcgctcggtcgcgaccgcg
gtggccgcgctcggcgccggcaatccgctgtacgacacggtgctgacgaccgacgcgccg
accgcacgccgcgcgtacgggctgctcggcggcgaactgcaggcgagcctgaagagcatg
ctgctgctcgacagccgctatgtgcgcgacgcggtgaccgatcgcgtccgtcagggcctc
gcgcccggatcgggcccgctcgcggccctgtcgtcgggcggcgccgcgctgtgcggcgac
aacacggccggcgtggtcgatccgacgctgccgccggaacgccggatcggttcgcgcgcc
gggtgctacggcgggacgccctatcagcccgtcgtctgggggcaggcgttcggcggccgc
agccggctcggaggcgacggcaacgcatcgtcgatcaaccgcagcatgacgggcttcatc
gccggcgccgacatggcgctcaacgacaagtggcgcgcgggcctggccgcgggcgtcacg
cacagctcgctcgacaacgaccagagttcgtcggcggcggtgaacagctactacgtgtcg
ctgtacggcggcgcgcagtatggcgcgctcggcgtgcgcggcggcgcgtcgtacacgtgg
tatcgaatcaacagcgaccgctatccgggcttcgcgggcttctccgatcacgattcggcc
ggctacaacgcgcattcggcgcaggtgttcggcgaagtcggctacgcgctgccggtcggg
ccggtcgcgatcgaaccgttcgcgggcctcgcgtatgtgaacctgcataccgacggctat
acggaaaccggcggcgcggccgcattgcgcgccggcggcgagacgacccacgtcggcttc
tcgacgctcggcgtgcgtgcggcgtcgcagctcggctcgatcgcgagcggcacgttcacc
gcgcgcgggacggtcggctggcggcatgcgttcggcaacgtgcggccgtcgtcggcgttc
acgttcgcgaacggcggcacgtcgttccaggtgtcgggcgtgccgattgctcgcgacagc
gcggtgctcgaggccggcatcgacgcgaacatcacgaagcgcctgaccctcggcctcacg
tacagcggccaatacggcagcggcgtgcgcgacaacgcgatcctcggcaacatcctgtgg
aaattctga
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