Burkholderia sp. MS389: GJG85_22910
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Entry
GJG85_22910 CDS
T10544
Name
(GenBank) GAF domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
burm Burkholderia sp. MS389
Brite
KEGG Orthology (KO) [BR:
burm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
burm03000
]
GJG85_22910
Transcription factors [BR:
burm03000
]
Prokaryotic type
Helix-turn-helix
Other families
GJG85_22910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_lid_14
PAS_4
HTH_30
HTH_23
AAA
HTH_Tnp_ISL3
HTH_29
AAA_5
HTH_7
HTH_28
AAA_2
AAA_22
HTH_50
HTH_22
AAA_7
HTH_1
NUMOD1
TIP49
Xre-like-HTH
AAA_16
Parvo_NS1
HTH_17
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QRR16222
LinkDB
All DBs
Position
2:complement(1438825..1440873)
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AA seq
682 aa
AA seq
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MRDDVEQAAGSRAAHPAGWPAPSIQKAHERSETFGLQVSARPDYDVLSNAALVLKREQSR
VLCVHAMPVMETLHEQIVNTQSMIVLTDAEGLILHSIGDDDFLRRAEKVALRPGANWAES
RQGTNAIGTALAELCPMVVHGDQHFLAANRFLTCSSVPILDPYGDAIGVLDVTGDHRSYH
QHTMALAKMSVQMIENHLFTTTFQETLQVSFHGRPEFLGTLMEGIVAFTADGRFLSANRS
AQFQLGMPLSALRAHTLSSLFDVTSAQLIDRMRASTDRHLMLNLGNGAVVCARVHFRRAT
LAEGSRPTDVHDAGAPAARANAAPAPAAGTSAGLSRLNYLDTGDAQVACVIAKVRKVIGK
DIPILITGETGTGKELLAQAIHNDSPRRDAPFVAVNCASIPETLIESELFGYEEGAFTGA
RRKGAIGKLLQANGGTLFLDEIGDMPYPLQVRLLRVLQERLVNPLGSTKTIAVDIAIICA
THRDLREMIAQNRFREDLYYRLNGLVVRLPPLRDRTDLAVVVQKMLQREAFAGPGGPPLS
VAPDVMELFVRCTWPGNFRQLGNLLRTAAAMVDDDGEIRREHLPDDFFDDLRRGDAVQTG
QAVPATPDSPAAASTAAGPGAADALPSVDARLQDVAASAIAAALARHGGNVSAAARALGV
SRNTIYRKMPAADAGRQPSDES
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgacgtagagcaggcggccgggtcacgggccgcgcatcccgctggctggccc
gcgccgtcgatccagaaggcccacgagcgctcggagacgttcggcctccaggtatcggca
cgacccgactacgacgtgctgtcgaacgcggcgctggtgctcaagcgcgagcagagccgg
gtgctgtgcgtgcacgcgatgccggtgatggagacgctgcacgagcagatcgtcaacacg
cagagcatgatcgtgctgaccgatgcggaagggctgatcctccattcgatcggcgacgac
gatttcctgcgccgcgcggagaaggtcgcgctgcgcccgggcgcgaactgggcggagagc
cggcagggcaccaacgcgatcggcacggcgctggcagagctgtgcccgatggtcgtccac
ggcgaccagcacttcctggccgcgaaccgcttcctgacctgttcgagcgtgccgatcctc
gatccgtacggcgacgcgatcggcgtgctcgacgtgacgggcgaccaccgcagctatcac
cagcatacgatggcgctcgcgaagatgtcggtgcagatgatcgagaatcacctgtttacg
acgacctttcaggaaacgctgcaggtgtcgtttcatggccgccccgagttcctcggcacg
ctgatggaggggatcgtcgcgttcaccgccgacgggcgcttcctgtcggccaatcgcagc
gcgcagttccagctcggcatgccgctctcggcgctgcgcgcgcacacgctgtcgtcgctg
ttcgacgtcaccagtgcgcagctgatcgaccgcatgcgcgcgagcaccgaccggcacctg
atgctcaatctcggcaacggtgcggtggtctgcgcgcgcgtgcacttccgccgcgcgacg
ctcgccgaaggcagccggccgacggacgtccacgacgcgggcgcgccggccgcacgcgcg
aacgcggcgcccgcgccggcggccggcacgtcggccggcctgtcgcggctcaactatctc
gacaccggcgatgcgcaggtcgcgtgcgtgatcgcgaaggtgcgcaaggtgatcggcaag
gacatcccgatcctgatcaccggcgagaccggcaccggcaaggaactgctcgcgcaggcg
atccacaacgactcgccgcggcgcgacgcgccgttcgtcgcggtcaactgcgcgtcgatt
ccggagacgctgatcgagtccgagctgttcggctacgaggagggcgcatttaccggcgcg
cgccgcaagggggcgatcggcaagctgctgcaggcgaacggcggcacgctgttcctcgac
gagatcggcgacatgccgtatccgctgcaggtgcggctgctgcgcgtgctgcaggagcgc
ctcgtgaacccgctcgggtcgacgaagacgattgccgtggacatcgcgatcatctgcgcg
acgcaccgcgacttgcgcgagatgatcgcgcagaaccgtttccgcgaggatctctactac
cggctgaacggcctcgtggtgcgcctgccgccgttgcgcgaccgcacggatctcgcggtc
gtcgtgcagaagatgctgcaacgcgaggcgttcgcggggccgggcgggccgccgctgtcc
gtcgcgccggacgtcatggagttgttcgtgcgctgcacgtggccgggtaacttccgccag
ctcggcaacctgctgcgcacggcggcggccatggtcgacgacgatggcgaaatccggcgc
gagcacctgccggacgacttcttcgatgacctgcggcgcggcgatgccgtgcagaccggg
caggccgtgccggccacgcccgattcgcccgccgcggcgagcaccgcggccgggccgggc
gccgcggacgcgttgccttccgtcgatgcgcgcctgcaggacgtcgccgcgtccgcgatc
gccgccgcgctggcccgtcacggcggcaacgtgtccgccgcggcgcgcgcgctcggcgtc
tcgcgcaacacgatctaccggaagatgcccgccgccgacgcggggcgccagccgtccgac
gaaagctga
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