Burkholderia sp. MS389: GJG85_27980
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Entry
GJG85_27980 CDS
T10544
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
burm Burkholderia sp. MS389
Pathway
burm02020
Two-component system
burm02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
burm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GJG85_27980
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
GJG85_27980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
burm02035
]
GJG85_27980
Bacterial motility proteins [BR:
burm02035
]
Flagellar system
Chemotaxis proteins
MCPs
GJG85_27980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
dCache_1
Mod_r
DUF948
Motif
Other DBs
NCBI-ProteinID:
QRR17158
LinkDB
All DBs
Position
2:2576796..2578658
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AA seq
620 aa
AA seq
DB search
MHFWRKLSIQNKLILSMTSCLLVFVAISSGLSVRLIGNAVRDRVVREELPTAVNGIRADV
QRQMAGPIAASRILARDAFLLQWEADGEPDAGTRNWIQLAKNVKDEQMAASVQWVSVKSG
NYYNEAGLQRKVTDKDQWLTSFLSSGKAYDVNMDREVTVGGYMMFINSRVELDGVPIGAA
SMSLSVDALAKGISAYRIGETGFAYLVRPDGAIMMHRDTSLIDGKHFLKDEPGLPGEASS
TLLAGKPYAYLSYEGDGGARFIATSFIPELNAYVVVQVPEAELLGPVTRAIRSAALVAAV
VGLGVALLVIWLVGRAIAAPIRRAATLLSEIASGQGDLTRRMAVESEDEIGQLSDAFNRF
VSSLSTLVHRIRAASASIATGSAQIASGNADLSERTEGQSSNLERTASSMEEITAVVRNN
TETATTAAKMINGAADTAARGGQVVGEVVTTMEQISDASQRISEIIVMIDSISFQTNILA
LNAAVEAARAGEQGRGFAVVASEVRNLAQRSAQAAKEIKSLIEHSAGTVGAGSRLVREAG
KVMSDVVSQVQGVSAMMSEIAEASLEQSAGIDQIGDAVQSLDQMTQQNAALVEESAAAAE
SLKQQAAELTKLVSAFKVDE
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcatttctggcgcaagctttccattcagaacaagctgattctcagcatgacgagttgc
ctgctcgtgttcgtcgcgatttcgagcgggctcagcgttcgtttgatcggcaacgcggtg
cgcgatcgcgtcgtccgcgaagagttgccgaccgccgtgaacggcattcgcgccgacgtg
cagcgccagatggccggcccgatcgccgcgtcgcgcattctcgcgcgcgacgcgttcctg
ctgcaatgggaagccgacggcgaacccgatgccggcacgcgcaactggatccagctcgcg
aagaacgtaaaggacgagcagatggccgcgtccgtgcagtgggtgtcggtgaagagcggc
aactactacaacgaagccggcttgcagcggaaggtgaccgacaaggatcagtggctgacc
agcttcctgtcgtcaggcaaggcgtacgacgtgaacatggatcgcgaggtgaccgtcggc
ggctacatgatgttcatcaacagccgcgtggagctggacggcgtgccgatcggcgcggcg
agcatgagcctgtccgtcgatgcgctcgcgaaggggatctcggcttaccggatcggcgag
accgggtttgcgtacctcgtgcgccccgacggcgcgatcatgatgcatcgcgatacgtcg
ctgatcgacggcaagcattttctgaaggatgagccggggctgccgggcgaggcgtcgtcg
acgctgcttgcgggcaagccgtatgcgtacctcagctacgagggtgatggcggcgcgcgg
tttatcgcgacgtcgttcattccggagctgaatgcgtatgtggtcgttcaggtgccggag
gctgaactgctcgggccggtgacgcgtgcgattcgcagtgcggcgctggttgcagcggtg
gtggggcttggggttgcgttgctcgtgatctggctggtcgggcgcgcgattgctgcgccg
attcgtcgggcggcgacgctgctgtcggagatcgccagcggtcagggcgatttgacgcgc
cgcatggcggtcgagagcgaggacgagatcgggcagctgtcggatgcgttcaaccggttc
gtgtcgtcgttgtcgacgctggttcatcggattcgtgcggcttcggcttcgattgcgacc
ggctcggcgcagattgcttcggggaatgcggatctgagcgaacgcaccgaagggcaatcg
agcaacctggagcggacggcttcgtcgatggaagagatcacggccgtggtgcgcaacaac
accgagacggcgactaccgcggcgaagatgatcaatggtgcggcggatacggcggcgcgc
ggtgggcaggtggtgggtgaggtcgtgacgacgatggagcagatcagcgatgcatcgcag
cggatctccgagatcatcgtgatgatcgacagtatctcgtttcagacgaatattttggcg
ttgaatgccgcggtggaggcggcgcgggcgggggagcaggggcgtgggttcgctgttgtc
gcttcggaagtgcggaatctggcgcagcgtagtgcgcaggctgcgaaggagattaagtcg
ctgatcgagcatagcgcggggacggtgggtgcggggtcgcggctcgttagggaggcgggg
aaggtgatgagcgacgttgtctcgcaggttcagggcgttagcgcgatgatgagcgagatt
gcggaggctagcctggagcagagtgccgggatcgatcagatcggggatgcagtgcagtct
ttggaccaaatgacgcagcagaatgcggctttggtcgaggaaagcgcggctgcggcagag
agtttgaagcagcaggcggcggaattgaccaagctggtttcggcttttaaggtggatgag
taa
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