Burkholderia sp. MS389: GJG85_28765
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Entry
GJG85_28765 CDS
T10544
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
burm Burkholderia sp. MS389
Pathway
burm03030
DNA replication
burm03410
Base excision repair
burm03420
Nucleotide excision repair
burm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
burm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GJG85_28765 (polA)
03410 Base excision repair
GJG85_28765 (polA)
03420 Nucleotide excision repair
GJG85_28765 (polA)
03440 Homologous recombination
GJG85_28765 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
burm03032
]
GJG85_28765 (polA)
03400 DNA repair and recombination proteins [BR:
burm03400
]
GJG85_28765 (polA)
Enzymes [BR:
burm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GJG85_28765 (polA)
DNA replication proteins [BR:
burm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GJG85_28765 (polA)
DNA repair and recombination proteins [BR:
burm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GJG85_28765 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GJG85_28765 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QRR17302
UniProt:
A0AAQ0A3L9
LinkDB
All DBs
Position
2:2756818..2759571
Genome browser
AA seq
917 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKEVSAEY
SACVFDAKGKTFRDDLYADYKANRPSMPPDLALQVEPIHGAVRALGWPLLMVEGVEADDV
IGTLAREAERHGMNVIVSTGDKDLAQLVTDRVTLVNTMTNETLDRDGVLAKFGVPPERII
DYLALIGDTVDNVPGVEKCGPKTAVKWLSQYDSLDGVIEHAADIKGVVGDNLRRALDFLP
LGRKLVTVDTACDLAPHLDSIEASLKSDGEARDLLRDIFARYGFKTWLREVESAPAEGGG
ADAPEGEPAPVIAADVVREYDTIQTWEQFDAWFAKIDAAALTAFDTETTALDPMLARLVG
LSFSIEPGKAAYLPVAHRGPDMPEQLPLDEVLARLKPWLESADRKKVGQHLKYDAQVLAN
YDIALNGIEHDTLLESYVLESHRTHDMDSLALRHLGVKTIKYEDVAGKGAKQIGFDEVAL
EQAAAYAAEDADITLQLHQALYPQVAREPGLERVYREIEMPVSLVLRKMERTGVLIDDVL
LQAQSTEIATRLIELEGEAYELAGGEFNLGSPKQIGQIFFEKLQLPVVKKTPSGAPSTDE
EVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPSTGRVHTNYAQAVAVTGRLAS
NDPNLQNIPVRTAEGRRIREAFIASPGHRIVSADYSQIELRIMAHISGDASLLRAFSQGE
DIHRATAAEVFGVTPLEVNSDQRRIAKVINFGLIYGMSAFGLASNLGITRDAAKLYIDRY
FTRYPGVAQYMEDTRAIAKEKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGT
AADLIKLSMIAVDDWLTRDRLASRMIMQVHDELVLEVPDSELSLVREKLPEMMCGVAKLK
VPLVAEVGAGANWEEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgtggccctggcggggagccgaccgga
gcgctctacggaatcatcaacatgctgcgccgtatgcgcaaggaagtcagtgcagagtat
agcgcttgcgtgttcgatgcaaagggcaagacgttccgcgacgacctttatgcggactat
aaggcaaaccgtccgtcgatgccgcccgacctcgcgttgcaggtcgagccgatccacggc
gcggtgcgcgcgctcggctggccgctgctgatggtcgaaggcgtcgaggccgacgacgtg
atcggcacgctcgcgcgcgaagccgaacggcacgggatgaacgtgatcgtgtcgacgggc
gacaaggatctcgcgcagctcgtgaccgaccgcgtcacgctcgtcaacacgatgaccaac
gagacgctcgaccgcgacggtgtgctcgcgaagttcggcgtgccgcccgagcgcatcatc
gactacctcgcgctgatcggcgacaccgtcgacaacgtgccgggcgtcgagaaatgcggg
ccgaagacggccgtgaaatggctgtcgcaatacgacagcctcgatggcgtcatcgaacac
gcggccgacatcaagggcgtggttggcgacaacctgcgccgcgcgctcgacttcctgccg
ctcggccgcaagctcgtgacggtcgacaccgcgtgcgatctcgcaccgcatctcgactcg
atcgaagcgtcgctgaagagcgacggcgaggcgcgcgacctgctgcgcgacatcttcgcg
cgctacggcttcaagacctggctgcgcgaagtcgagagcgcaccggccgaaggcggcggc
gctgacgcgccggaaggcgagccggctccggtgatcgcagccgacgtcgtgcgcgaatac
gacacgatccagacttgggaacagttcgatgcgtggttcgcgaagatcgatgcggccgcg
ctgaccgcgttcgacaccgagacgaccgcgctcgatccgatgctcgcgcggctcgtcggc
ctgtcgttctcgatcgagccgggcaaggcggcctacctgccggtcgcgcaccgcggcccc
gacatgcccgagcagcttccgctcgacgaagtgctcgcgcgcctgaagccgtggctcgaa
tcggccgatcgcaagaaggtcggccagcacctgaagtacgacgcacaggtgctcgcgaac
tacgacatcgcgctgaacggcatcgagcacgacacgctgctcgaatcgtacgtgctcgaa
tcgcaccgcacgcacgacatggacagcctcgcgctgcggcatctcggcgtcaagacgatc
aagtacgaggacgtggccggcaagggcgcgaagcaaatcggtttcgacgaagtggcgctc
gagcaggccgccgcgtatgcagccgaagatgcggacatcacgctgcagcttcaccaggcg
ctgtatccgcaggtcgcgcgcgagccgggcctcgagcgcgtgtaccgcgagatcgagatg
ccggtgtcgctcgtgctgcgcaagatggagcgcaccggcgtgctgatcgacgacgtactg
ctgcaggcgcaaagcaccgaaatcgcgacgcgcctgatcgaactcgagggcgaggcgtac
gaactggcgggcggcgaattcaatctcggctcgccgaagcagatcgggcagatcttcttc
gagaagctgcagttgccggtcgtgaagaagacgccgagcggcgcgccgtcgaccgacgag
gaagtgctgcagaagctcgccgaggactacccgttgccgaagctgctgctcgagcatcgc
gggctgtcgaagctgaagtcgacctataccgacaagctgccgcggatggtgaaccccagc
accggccgcgtgcacacgaattatgcgcaggcagtcgcggtgacgggccgccttgcgtcg
aacgaccccaatcttcagaacattccggtgcgcacggccgaaggccggcgcatccgcgag
gcgttcatcgcgtcgccgggccaccggatcgtgtcggccgactattcgcagatcgaactg
cggatcatggcgcacatctcgggcgacgcgtcgctgctgcgcgcgttctcgcaaggcgag
gacatccaccgcgcgacggccgccgaggtgttcggcgtgacgccgctggaggtcaattcc
gaccagcgccggattgcgaaggtgatcaacttcgggctcatctacgggatgagcgcgttc
gggctcgcatcgaatctcggcatcacgcgcgacgcggcgaagctctatatcgaccgctat
ttcacgcgctatccgggcgtcgcgcagtacatggaagacacgcgcgcgatcgcgaaggag
aagggctacgtcgaaaccgtgttcggtcgccgcctgtggctgccggagatcaacggcggc
aacggtccgcgccgccaggcggccgagcgcgcggccatcaatgcaccgatgcagggcacg
gcggccgacctgatcaagctgtcgatgatcgcggtggacgactggctcacgcgcgaccgg
cttgcgtcgcggatgatcatgcaggtgcacgatgaactggtgctcgaggtgcccgacagc
gagctgtcgctcgtgcgcgagaaactgccggaaatgatgtgcggcgtcgcgaagctgaag
gtgccgctggtcgccgaagtgggcgccggcgcgaactgggaagaggcacactga
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