Burkholderia sp. MS389: GJG85_33675
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Entry
GJG85_33675 CDS
T10544
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
burm Burkholderia sp. MS389
Pathway
burm02020
Two-component system
burm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
burm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GJG85_33675
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GJG85_33675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
burm03021
]
GJG85_33675
Transcription machinery [BR:
burm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GJG85_33675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QRR18339
LinkDB
All DBs
Position
3:complement(895123..896556)
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AA seq
477 aa
AA seq
DB search
MPVSLALQMRQHLALTPRLQQSLRLLQLSSLEFQQELRQALDMNPFLEDGQSDDETAAAT
PEQPPEAAAPDAAPERDDIRPPDGEVPFTAAPAPRGTSRQGDDADGLSPGEWMAAEPSLH
QQLHDALRLYPLNRRDREAARLVIDALDDDGYLRQELAELLVAADPALLLSEQDLAVALR
LVQMLDRPGIAARSLSECLVLQLDAIPAGTPALAEAKAIAREHLERLARRETAEIQRRLG
CNAHTLQAACALVRGLDPRPGNHYGSTRGDYVVPDVIVRQVRDEWIVTINPAVLPRARLH
ERYATLFAQSSGERDSPLGQQLQEARWLIRNVQKRFDTIQRVGECIVARQRDFFRYGEIA
MKPLVLRDIAEELDLHESTVSRATGNKYMATPHGTFEFKHFFPRKLEAAGKGVCSASAAK
VLIRDMIAAERHTDPLSDVALAENLAGRGILLARRTVTKYRQAMKIPPADLRRRDAA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtctcgcttgcgctgcagatgcgacagcatctggcacttacgccgaggctccag
cagtcgctgcgactgcttcagttgtcctcgctcgagtttcaacaggaattgcgccaggcg
ctcgacatgaacccgtttctggaagacggccagagcgacgacgaaaccgctgcggcgacc
cccgagcagccgcccgaagcggcggcgcccgacgcggcgcccgagcgcgacgacatccgg
ccgccggacggcgaggtgccgtttacggccgcgcccgcgccgcgcggcacgagccgtcag
ggcgacgacgcggacggcctgtcgccgggcgaatggatggccgccgagccgtcgctgcat
cagcagctgcacgatgcgctgcgactctatccgctcaaccggcgcgaccgcgaagccgcg
cgcctcgtgatcgatgcgctggacgacgacggctatctgcgtcaggagctggccgaactg
ctggtcgccgccgatccggccttgctgctgtcggagcaggatctggcggtcgcgctgcgg
ctcgtgcagatgctcgaccggccgggcatcgcggcccgctcgttgtccgagtgcctggtg
ctgcagctcgacgcgattccggccggcacgccggcgctcgcggaagcgaaggcgatcgca
cgcgagcatctggagcggctcgcgcgtcgcgagacggccgagatccagcggcgcctcggc
tgcaacgcgcacacgctgcaggcggcctgcgcgctggtgcgcgggctcgatccgcgcccc
ggcaatcactacggcagcacgcgcggcgactacgtggtgcccgacgtgatcgtgcgccag
gtgcgcgacgaatggatcgtgacgatcaatccagccgtgctgccgcgcgcccgcttgcac
gagcgctatgcgacgctgttcgcgcagtcgagcggcgaacgcgattcgccgctcggccag
cagttgcaggaagcgcgctggctgatccgcaacgtgcagaagcgcttcgacacgatccag
cgcgtgggcgaatgcatcgtcgcgcgtcagcgcgatttcttccgctacggcgagatcgcg
atgaagccgctcgtgctgcgcgacatcgcggaagagctcgacctgcacgaatcgaccgtc
tcccgcgcgaccggcaacaagtacatggccacgccgcacggcacgttcgagttcaagcat
ttcttcccgcgcaagctcgaggcggccggcaagggcgtgtgttcggcgtcggccgcgaag
gtgctgatccgcgacatgatcgcggccgagcggcataccgacccgctgtccgacgtcgcg
ctcgcggagaacctcgcgggccgcggcattcttcttgcgcgtcgcacggtgaccaagtat
cgccaggcgatgaagattccgccggccgacctgcggcgtcgcgacgccgcgtga
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