Burkholderia sp. THE68: BTHE68_08350
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Entry
BTHE68_08350 CDS
T10528
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
burt Burkholderia sp. THE68
Brite
KEGG Orthology (KO) [BR:
burt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
burt03019
]
BTHE68_08350 (cafA)
03009 Ribosome biogenesis [BR:
burt03009
]
BTHE68_08350 (cafA)
Messenger RNA biogenesis [BR:
burt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BTHE68_08350 (cafA)
Ribosome biogenesis [BR:
burt03009
]
Prokaryotic type
rRNA processing factors
BTHE68_08350 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
BBU27101
LinkDB
All DBs
Position
1:complement(890297..891766)
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AA seq
489 aa
AA seq
DB search
MNEEILINVTPQESRVALVQQGAVQELHVERTLSRGRVGNVYLGKVVRVLPGMQSAFIDI
GLERAAFLHVADIWHPRIAGEPHSSAPHVPIEKIVFEGQSLMVQVVKDPIGTKGARLSTQ
VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVLPADEKGGYIVRTIAEDATSE
ELAADVAYLRKTWATIVTQAQRVPPTTLLYQDLNLAQRVLRDFVNDETTRIQVDSRETYQ
MLADFAAEFTPAVASRLHHYTGERPLFDLYNIEAEIQRALSRRVDLKSGGYLMIDQTEAM
TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENVEHRDQV
LGELKKALSKDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPTCQGKGQVKTPRTV
CYDVLREIMRESRQFNPREFRVVASQEVIDLFLEEESQHLAMLMDFIGKPVSLQVESNLS
QEQYDIVLM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagaaatcctgatcaacgtcacaccgcaggaaagccgcgtcgcactggttcag
caaggcgccgttcaggaacttcacgtcgagcgcacgctgtcgcgcgggcgcgtcggcaac
gtgtatctcggcaaggtggtccgtgtgctaccgggcatgcagtccgcgttcatcgacatc
gggctcgagcgcgccgcgtttcttcatgtcgccgatatctggcatccgcgcatcgcgggc
gagccgcattcgtcggcaccgcatgtgccgatcgagaagatcgtcttcgaaggtcagtcg
ctgatggtgcaggtcgtgaaggacccgatcggcacgaagggcgcgcggctctcgacgcag
gtgagcatcgcggggcgcacgctggtttatctgccgcaggagccgcatatcggcatctcg
cagaagatcgagagcgaagcggagcgcgaggccgtgcgcgcgcgcctgaccgccgtgctg
cccgccgacgagaaaggcggctatatcgtgcgtaccatcgccgaggatgcgacgagcgag
gagctcgcggcggatgtcgcgtatctgcgcaagacgtgggcgacgatcgtcacgcaggcg
cagcgcgtgccgcccaccacgctgctttatcaggacctgaatctcgcgcaacgcgtgctg
cgtgatttcgtcaacgacgaaaccacgcgcatacaggtggattcgcgcgagacgtatcag
atgctcgcggatttcgcggcggagttcacgccggcggtggcttcacgcctgcatcattac
accggcgagcggccgctcttcgatctctacaacatcgaggcggagattcagcgggcgctg
tcgcggcgcgtcgatctcaagtcgggcggttatctgatgatcgaccagaccgaagcgatg
acgaccatcgacgtcaatacgggcggttatgtcggcgcgcgcaatttcgatgacaccatc
ttcaagacgaatctcgaagcagcccatacgatcgcgcggcaactgcgcctgaggaacctg
ggcgggatcatcatcatcgacttcatcgacatggagaatgtcgagcatcgcgatcaggtg
ctgggggaactgaagaaggcgttgtcgaaggatcgcacgcgcgtgacggtcaatggcttc
tcgcagctcgggttggtcgagatgacgagaaagcgcacgcgcgaatcgcttgcgcatgtg
ctgtgcgagccttgcccgacgtgtcagggcaaagggcaggtgaagacgccgcgcacggtg
tgctatgacgtgctgcgtgaaatcatgcgcgagtcgcggcagttcaatccgcgcgagttt
cgtgtggtggcttcgcaggaggtgatcgatctctttctcgaggaagagtcgcagcatctg
gcgatgctgatggacttcatcgggaagccggtttcgttgcaggtggagagtaatttgagt
caggagcagtatgacatcgtgttgatgtga
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