Burkholderia sp. THE68: BTHE68_14320
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Entry
BTHE68_14320 CDS
T10528
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
burt Burkholderia sp. THE68
Brite
KEGG Orthology (KO) [BR:
burt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
burt03009
]
BTHE68_14320 (rlmD)
Enzymes [BR:
burt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BTHE68_14320 (rlmD)
Ribosome biogenesis [BR:
burt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BTHE68_14320 (rlmD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
RrnaAD
Methyltransf_15
Methyltransf_23
TRM5-TYW2_MTfase
MTS
TRAM
Methyltrans_SAM
Cons_hypoth95
Methyltransf_11
PCMT
Methyltransf_32
Methyltr_RsmB-F
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
BBU27698
LinkDB
All DBs
Position
1:complement(1534309..1535724)
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AA seq
471 aa
AA seq
DB search
MSEAARKTPHRRRAAPAKSVTPDPNFVAPEIEIESLDMEARGVGRLVNEDGEPGKVIFVE
GALPGERVSYSSFRKKPSFEQAQVVNVLRESVLRTRPKCRFFGTCGGCSMQHLDVRAQIA
VKQRVLEDNLQHLSKLRAETMFRPIHGPSWGYRYRARLTVRYVEKKGGVLVGFHERKSSY
VADMTSCEVLPPHVSAMLVPLRHLVAGLSIRDRMPQIELALGTDVTALVLRILEPLTEAD
EALIRTFADEHGVQFWLQPKGPDTVYPFYPLDQELAYTLPEFDIRMPFKPTDFTQVNHQI
NRVLVSRALSLLAPEKSDRVLDLFCGIGNFTLPLARVSREVVGIEGSEALTARALENAKA
NGVDGHTSFACRNLFEVTADDLRALGAFDKFLVDPPREGALAVAKALADIAQSGDGPLPK
RIVYVSCNPATLARDAGLLVHEAGYRMKGAGVVNMFPHTSHVESIALFERD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgaagccgcccgaaaaactccccatcgccgccgcgccgcgccggcgaagtccgtc
acgcccgatccgaacttcgtcgccccggaaatcgaaatcgagtcgctcgatatggaagcg
cgcggcgtcggccgtctggtcaacgaggacggcgagccgggcaaggtcatcttcgtcgaa
ggcgcgctgccgggcgaacgcgtcagctattcgagttttcgcaagaagccgagtttcgag
caggcgcaagtggtgaacgtgctgcgcgagagcgtgttgcggaccaggccgaagtgccgg
tttttcggcacctgcggcggctgctcgatgcagcatctcgatgtgcgcgcgcagatcgcg
gtgaagcagcgcgtgctcgaggacaacctgcagcatctgtcgaagctgcgcgcggaaacc
atgttccggccgattcacggtccgtcgtggggatatcgctatcgcgcgcgcctcactgtg
aggtatgtcgaaaagaagggcggcgtgctggtgggctttcatgagcgcaagagcagctat
gtcgccgacatgacgagctgcgaagtgctgccgccgcacgtttccgcgatgctcgtgccg
ctgcgccatctggtggctgggctctcgatccgcgatcgcatgccgcagatcgaactcgcg
ctcggtaccgacgtcaccgcgctcgtgctgcgcattctggagccgctgaccgaagcggac
gaagcgttgatccgcacctttgccgacgaacacggcgtgcagttctggctgcagccgaag
ggcccggatacggtctatccgttctatccgctcgatcaggaactggcttacacgctgccg
gaattcgatatccgcatgccgttcaagccgaccgatttcacgcaggtgaatcaccagatc
aatcgcgtgctggtgagccgggcgctcagcctgctcgcgccggaaaagtccgaccgcgtg
ctcgatctgttctgcggcatcggcaatttcacgctgccgctcgcgcgggtgtcgcgcgaa
gtggtgggcatcgagggcagcgaggcgctgaccgcgcgtgcgctggagaacgcgaaggcc
aatggcgtcgacgggcatacgtcgttcgcatgccgcaacctgttcgaagtcaccgccgac
gaccttcgcgcgctcggcgcgttcgacaagtttctggtcgatccgccgcgtgaaggcgcg
cttgcggtagcgaaggcgctcgcggacatcgcgcagagcggcgacggtccgttgccgaag
cgcatcgtctacgtgtcgtgcaacccggcgacgcttgcgcgcgacgcgggcctgctggtg
cacgaagccggttatcggatgaagggcgcgggggtggtgaacatgtttccgcacacgtcg
cacgtcgagtcgatcgcgctgttcgagcgggactga
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