Burkholderia sp. THE68: BTHE68_23420
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Entry
BTHE68_23420 CDS
T10528
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
burt Burkholderia sp. THE68
Pathway
burt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
burt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTHE68_23420 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
burt03019
]
BTHE68_23420 (recQ)
03400 DNA repair and recombination proteins [BR:
burt03400
]
BTHE68_23420 (recQ)
Enzymes [BR:
burt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BTHE68_23420 (recQ)
Messenger RNA biogenesis [BR:
burt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BTHE68_23420 (recQ)
DNA repair and recombination proteins [BR:
burt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BTHE68_23420 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BBU28608
LinkDB
All DBs
Position
1:complement(2524088..2525935)
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AA seq
615 aa
AA seq
DB search
MARSLEILNEIFGYPAFRGQQAEIVEHVANGGDSLVLMPTGGGKSLCYQIPSLVRSEAGL
GAGIVVSPLIALMQDQVAALTEVGVRAAYLNSTLSGAEAAATERALREGDIDLLYVAPER
LMTPRFLELLERARVGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPDVPRIALTATAD
AITRDEIVHRLALDDARIFVSSFDRPNIRYRIVEKDNARSQLLDFIRAEHTNKDGTTDAG
VVYCLSRRKVEETADWLKGQGVRALPYHAGMEFETRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESEADD
AHKRVQSGKLDALLGLCEAASCRRVRLLAYFGETSKPCGNCDTCLEPPASFDATREAQMA
LSCVYRAQKASGFRFGAGHLIDILRGTRSEKVLQRGHEKISTFGVGAALSEAEWRAVFRQ
LVAFGYLAVDHDGFGALVLTDASKPVLKGEESVTLRKYVKPTRARQSSSRTGERADPTAG
MSAREKARWDRLRTWRAETAKSDGVPAYVIFHDATLAEIARSDPDTVDDLRHIPGIGVRK
LERFGDELLDVVGSE
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcccggtcgctcgaaatactcaacgaaatcttcggctatcccgcatttcgcggacaa
caggcggagatcgtcgagcatgtcgcgaacggcggcgattccctcgtgctgatgcccact
ggcggcggcaagtcgctgtgctatcagattccgtcgctcgtgcgcagcgaggccgggctt
ggcgccggcatcgtggtgtcgccgctcatcgccttgatgcaggaccaggtcgccgcgctg
acggaagtcggcgtgcgcgccgcgtatctgaattccacattgtcgggggccgaggctgcg
gccaccgaacgcgcgctgcgcgagggcgatatcgacttgctctacgtcgcgccggaacgc
ctgatgacgccgcgctttctcgaactgctcgaacgcgcgcgcgtcggcctgttcgcgatc
gatgaagcgcactgcgtgtcgcagtggggccacgatttccgccccgaatatatccagctt
tccgtgctgcacgagcggtttcccgatgtgccgcgcatcgcgctcaccgcgaccgccgac
gcgatcacgcgcgatgaaatcgtccaccggctcgcgctggacgatgcgcgcattttcgtt
tccagcttcgatcggccgaatattcgttatcgaatcgtcgagaaggacaacgctcgctcg
cagctgctcgatttcatccgcgccgagcacacgaacaaggacggcacgaccgatgcgggc
gtcgtatattgcctgtcgcggcgaaaggtcgaggagaccgcggactggctgaaaggccag
ggcgttcgcgcgctgccgtaccacgctgggatggagttcgagacgcggcagaagcaccag
gaaatgttccagcgcgaggaaggcatcgtcatgtgcgcgacgatcgcgttcggcatgggc
atcgataaaccggacgtgcgttttgtcgcgcatctggatttgccgaagagcgtcgagggc
tactatcaggaaaccggtcgcgccggccgcgacggcatgccggcgaacgcgtggatggcg
tacggattgggcgacgtcgtgcaacagcgcaagatgatcgacgagtccgaagccgacgac
gcgcacaagcgcgttcagagcgggaagctcgacgcgctgctggggttgtgcgaagcggcg
tcgtgtcgtcgtgtacgtttgctcgcgtacttcggcgagacgagcaagccgtgcggcaac
tgcgatacgtgtctggagccgcctgcgtccttcgatgccacgcgcgaggctcagatggcg
ctttcatgcgtttatcgcgcgcagaaggcgagcggctttcgtttcggcgcggggcatctc
atcgatattctgcgtgggacgcgcagtgagaaagtcctgcagcgcggacacgagaagatt
tcgaccttcggcgtcggcgcggcgctctccgaggcagagtggcgtgccgtgttccggcaa
ctggtcgcgttcggctatctcgccgtcgatcacgacggtttcggcgcgctcgtgctcacc
gacgcgagcaagcccgtcctcaagggcgaagagagcgtcacgctgcgcaagtatgtcaag
ccgactcgggcccgccagtcttccagccgcacgggcgagcgcgcggatccgaccgctggc
atgtcggcacgcgagaaggctcgttgggaccgtctgcgtacctggcgcgcggaaaccgca
aagagcgacggcgtgccggcctacgtcatctttcacgacgccacgcttgccgaaatcgcc
cgcagcgatcccgatacggtcgacgatctgcgccatattccgggcatcggcgtgcgcaaa
ctggagcgcttcggcgacgagctgctcgatgtcgtcggctccgaatga
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