Burkholderia sp. THE68: BTHE68_23430
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Entry
BTHE68_23430 CDS
T10528
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
burt Burkholderia sp. THE68
Pathway
burt03020
RNA polymerase
Brite
Enzymes [BR:
burt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BTHE68_23430 (rpoC)
Transcription machinery [BR:
burt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BTHE68_23430 (rpoC)
DNA repair and recombination proteins [BR:
burt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BTHE68_23430 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BBU28609
LinkDB
All DBs
Position
1:complement(2526115..2530356)
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AA seq
1413 aa
AA seq
DB search
MKALLDLFKQVQQEEVFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVIDPGMTPLKARQIMTEEDYYNKVEEYGDEFRAEM
GAEGVRELLRAINIDEQVEMLRTELKNTGSEAKIKKYAKRLKVLEAFQRSGIKPDWMVLE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKLMALELFKPFIFNKLEVMGVATTIKAAKKEVENQTPVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLFPANGDPSIVPSQDIVLGLYYASREAINGKGEGMTFTGVSEVIRAYENK
EVELASRVNVRITEMVANEDTSEGAPAFVPKISLYATTVGRSILSEILPPGLPFTVLNKP
LKKKEISRLINTAFRKCGLRETVIFADQLMQMGFRLATRAGISICVDDMLVPPQKETIVG
DAAKKVKEYDRQYMSGLVTAQERYNNVVDIWSATSESVGKAMMEQLATEPVTDRDGNETK
QESFNSIYMMADSGARGSAVQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVVEAL
RDRILGRVAVADVVNPETQETLYASGDLLDEDAVEEIERLGIDEVRVRTPLTCETRYGLC
ASCYGRDLGRGSRVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASTVEAKSN
GTVRFTATMRYVTNAKGEQVVISRSGEAIIADDFGRERERHKVPYGATLLQLDGAQIKAG
AQLAQWDPLTRPIITEWGGTVKFENVEEGVTVAKQIDDVTGLSTLVVIDVKRRGSQASKS
VRPQVKLLDANGEEVKIPNTEHSVQIGFQVGALITVKDGQQVQVGEVLARIPVEAQKTRD
ITGGLPRVAELFEARSPKDAGILAEVTGTTSFGKDTKGKQRLVITDLEGNQHEFLIAKEK
QVLVHDGQVVNKGEMIVDGPADPHDILRLQGIEALSRYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQIVDNGDTRFIPGEQVERSDMLDENDRMIADDKRPASYDNVLLGITKASL
STDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAFHKARKAKES
SDRERFDQIAAEEAFDFGTPEAPATEQAPHTNE
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctctgctcgatctattcaagcaagtccaacaagaagaagtttttgatgcgatc
aagatcggcctcgcgtcgcccgacaagattcgttcttggtcgttcggcgaagtgaagaag
ccggagaccatcaactaccgcacgttcaagccggagcgggatggtctgttctgcgcgaag
atttttggtccgatcaaggactacgaatgtctttgcggcaagtacaagcgcctgaagcac
cgcggcgtgatctgcgagaagtgcggcgtcgaagtgacgctggcgaaggtgcgtcgcgaa
cggatgggccacatcgaactggcctcgccggtcgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtgctggacatgacgctgcgcgacatcgagcgcgtgctgtac
ttcgaagcatacgtggtgatcgatccgggcatgacgccgctgaaagcgcggcagatcatg
acggaagaggattactacaacaaggtcgaagagtacggtgacgaattccgcgccgagatg
ggcgcggaaggcgtgcgcgagctgctgcgcgcgatcaacatcgacgaacaggtcgagatg
ctgcgcaccgaactcaagaacacgggttcggaagcgaagatcaagaagtacgcgaagcgc
ctgaaggtgctcgaggcattccagcgttcgggcatcaagccggactggatggtgctcgaa
gtgctgccggtgctgccgccggaactgcgtccgctggtgccgctggatggcggccgtttc
gcgacgtcggacctgaacgacctgtatcgccgcgtgatcaaccgtaacaaccggttgaag
cgtctgctcgaactgaaggcgcctgaaatcatcgtccgcaacgaaaagcggatgctgcag
gaagccgtcgattcgctgctcgacaacggtcgtcgcggcaaggccatgacgggcgcgaac
aagcgtccgctgaagtcgctcgccgacatgatcaagggtaagggcggccgcttccgtcag
aacctgctcggtaagcgcgtggactattcgggccgttcggtgatcgtggtcggcccgacg
ctcaagctgcatcagtgcggtctgccgaagctgatggcgctcgaactgttcaagcctttc
atcttcaacaagctggaagtgatgggcgtcgcgacgaccatcaaggccgcgaagaaggaa
gtcgagaaccagacgccggtggtgtgggacattctcgaagaggtgatccgcgagcatccg
gttatgctgaaccgcgcgcctacgcttcaccgtctcggcattcaggctttcgagccggtg
ctgatcgaaggcaaggcgattcagctgcacccgctcgtttgcgcggcgttcaacgccgac
ttcgacggtgaccagatggctgttcacgtgccgctgtcgctcgaagcgcagatggaagcg
cgcacgctcatgctggcgtcgaacaacgtcctgttcccggccaacggcgatccgtcgatc
gtgccgtcgcaggatatcgtgctgggcctgtactacgcgtcgcgtgaagcgatcaacggc
aagggcgaaggcatgacgttcacgggcgtgtcggaagtgatccgcgcgtacgagaacaag
gaagtcgagttggcttcgcgcgtcaacgtgcgtatcaccgaaatggtggcgaacgaagac
acgagcgaaggcgcgccggcgttcgtgccgaagatctcgctgtacgcgaccacggtcggc
cgttcgatcctgtcggagattctgccgccggggctgccgttcacggtgctgaacaagccg
ctgaagaagaaggaaatctcgcgcctgatcaacacggcgttccgcaagtgcggtctgcgc
gagacggtgatcttcgccgaccagctgatgcagatgggtttccgtcttgcaacgcgcgcc
ggcatctcgatctgcgtggacgacatgctcgtgccgccgcagaaagagacgatcgtcggc
gacgccgcgaagaaggtgaaggagtacgaccgtcagtacatgtcgggtctcgtcaccgcg
caggaacgctacaacaacgtggtcgacatctggtcggcgacgtcggaaagcgtcggcaag
gcgatgatggaacagctcgcgacggagcctgtcaccgaccgtgacggcaacgagacgaag
caggagtcgttcaactccatctacatgatggccgactcgggcgcgcgtggttccgcggtg
cagattcgtcagctggccggtatgcgcggcctgatggcgaagccggacggctcgatcatc
gagacgccgattacggcgaacttccgcgaaggcctgaacgtgttgcagtacttcatctcg
acccacggcgcccgtaagggtctggcggatacggcgctgaagaccgcgaactcgggttac
ctgacgcgtcgtctggtcgacgtgacgcaggatctggttgtcgtcgaagacgattgcggt
acgtcgaacggcgtggcgatgaaagcgttggtggaaggcggtgaagtcgtcgaagcgctg
cgcgaccggattctcggccgcgtcgcggtggcggacgtcgtcaatccggaaacgcaggaa
acgctgtacgcgtcgggcgatctgctcgatgaagacgcggtcgaggaaatcgaacgcctc
ggcatcgacgaagtgcgcgtgcgtacgccgctcacctgcgaaacgcgctatggcctgtgc
gcctcgtgctacggccgtgacctcggccgtggttcgcgcgtgaacgtcggcgaagcggtg
ggtgtgatcgccgctcagtcgatcggtgagccgggcacgcagttgacgatgcgtacgttc
cacatcggtggtgcggcatcgcgtgcggcggttgcttcgacggtcgaagcgaagagcaac
ggtacggtgcgcttcacggccacgatgcgttacgtcaccaacgcgaagggcgagcaggtc
gtcatctcgcgttcgggcgaggcgatcatcgcggacgacttcggtcgcgagcgtgagcgt
cacaaggttccgtacggcgcgacgctgctgcagctcgacggcgcgcagatcaaggccggc
gcgcaactggcgcaatgggatccgctgacgcgtccgatcatcaccgagtggggcggtacg
gtgaagttcgaaaacgtcgaagaaggcgtgacggttgcgaagcagatcgacgatgtgacg
gggctttccacgctcgtcgtgatcgacgtgaagcgtcgcggctcgcaagcttcgaagagc
gtgcgtccgcaggtgaaactgctcgacgcaaacggcgaggaagtgaagatcccgaacacc
gagcattcggtgcagatcggcttccaggtcggcgcactgatcaccgtgaaggacggtcag
caagtgcaggtcggtgaagtgctggcgcgtatcccggttgaagcgcagaagacgcgtgac
attaccggtggtctgccgcgcgtggccgaactgttcgaagcgcgctcgccgaaggacgcg
ggtattctcgcggaagtcacgggcacgacgtcgttcggcaaggacacgaagggcaagcag
cgtctcgtcatcacggacctcgaaggcaatcagcacgagttcctgatcgcgaaggaaaag
caggtgctggtgcacgatggtcaggtcgtcaacaagggcgaaatgatcgtcgacggtcct
gccgatccgcacgacatcctgcgtctgcagggtatcgaggcgctgtcgcgctacatcgtg
gacgaagtgcaggacgtgtaccgtctgcagggcgtgaagatcaacgacaagcacatcgaa
gtgatcgtgcgtcagatgctgcgtcgtgtgcagatcgtcgacaacggcgatacgcgcttc
atcccgggcgagcaagtcgagcgttcggacatgctggacgagaacgaccgcatgatcgcg
gacgacaagcgcccggcgtcgtacgacaacgtgctgctcggtatcacgaaggcctcgctg
tcgaccgattcgttcatctccgcggcatcgttccaggaaacgacccgcgtgctgaccgaa
gcggcgatcatgggcaagcgcgacgatctgcgtggcctgaaggaaaacgtgatcgtcggc
cgtctgattccggccggtacgggtctcgcgttccacaaggcgcgcaaggcgaaggaatcg
tcggatcgcgagcgtttcgaccagatcgcggccgaagaggcattcgactttggcacgccg
gaggctccggcaacggagcaggcgccgcataccaacgagtaa
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