Burkholderia sp. THE68: BTHE68_44670
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Entry
BTHE68_44670 CDS
T10528
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
burt Burkholderia sp. THE68
Pathway
burt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
burt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTHE68_44670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
burt03019
]
BTHE68_44670
Enzymes [BR:
burt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BTHE68_44670
Messenger RNA biogenesis [BR:
burt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BTHE68_44670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BBU30733
LinkDB
All DBs
Position
3a:complement(299619..301049)
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AA seq
476 aa
AA seq
DB search
MSFASLGLIDRLLRNLQDLNYQTPTPVQTKAIPPVLSGRDVMAAAQTGTGKTAGFVLPLL
QRLVQDGPAVSSNRARVLVLVPTRELAEQVLQSFIDYGKGLDLRFLAAYGGVSINPQMMK
LRKGVDVLVATPGRLLDLNRQNAVQFDQVETLILDEADRMLDLGFARELNAVFAALPARR
QTLLFSATFTDDIRAMAASILRDPVNISVSPPNATASKIKQWVVPVDKKNKPELFMHLVS
ENDWEHALVFVKTRKGVDYLAAMLDEAGYAVDTIHGDKPQPARLRALERFKSGEVRMLVA
TDVAARGLDIDDLPLVINIDLPIVAQDYVHRIGRTGRAGASGVAVSLVCADEAPQLAAIE
ALIRHTLPREEEPGFEAEHRVPQTSETGQIIRKPKKPKKPKMPQAAPGAMQALGKKMPMQ
SGEKARRVATADKGTSLSSGNPFSVQKPSGKRANKPASGSRKPAGKSVGGRGKRQP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgcctcgcttggcctgatcgatcggttgctgcgtaatttgcaggacctcaat
taccagacacctacgccggtgcagaccaaggcgattcctcccgtgctcagcggcagggac
gtcatggctgcggcgcagaccggcactggcaaaacggcgggtttcgtgctgccgctgttg
caacgactggtgcaagacggtccggcggtgtccagcaaccgcgcgcgcgtgctcgtgctg
gtgcccacgcgtgagctggctgaacaagtgctgcaaagctttatcgattacggcaaaggt
ctcgacttacggtttctggccgcctacggcggcgtgagtatcaatccgcagatgatgaag
ttgcgcaagggcgtcgacgtgcttgttgccacgcccggccgtttgctggatctcaatcgc
cagaacgccgtgcagtttgatcaagtcgaaacgctgattctggatgaagccgaccgcatg
ctggatctgggctttgcgcgtgaactcaacgccgtctttgctgccttgcccgctcggcgc
caaaccctgttgttctccgccacgttcaccgatgatatccgcgccatggcggcaagcatc
ctgcgcgacccggtcaatatcagcgtcagcccacccaatgccacggccagcaagatcaag
cagtgggtggtgccggtggataaaaagaacaagcctgagctcttcatgcacctcgtctcc
gagaatgactgggagcacgcgctggtgttcgtcaaaacccgcaagggcgtggattatctg
gcggccatgctggatgaagcgggctacgcggtcgataccatccacggcgacaaaccgcaa
cccgcgcgcctgcgtgcgctggagcgcttcaagtcaggcgaagtacgtatgctcgtagcc
accgatgtggcggcgcgcggactggatatcgatgacctgccgctagtgatcaacattgat
ctgccgatcgtggcgcaagactatgtgcaccgtattggccgtaccggccgcgcgggcgca
agcggcgtggcggtgtccctcgtgtgtgccgatgaagcgccgcaacttgctgcgatcgaa
gcgctgatccggcatacgctgccccgcgaggaagagccgggatttgaagcagaacataga
gtgccgcagaccagtgagacgggccagatcatcaggaagcccaaaaagcccaagaagccg
aaaatgccgcaggccgcgcctggcgccatgcaggcgctcggcaaaaaaatgccgatgcaa
agcggcgaaaaagcgcggcgcgttgcgaccgcagataaaggcacaagcttgtccagcggc
aatccattcagcgtgcaaaagccatctggaaaacgcgcgaacaagccagcttcgggttca
cgcaagccggctggcaaatccgttggggggcgcggcaaacgccaaccctga
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