Burkholderia pseudomallei TSV202: X994_2126
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Entry
X994_2126 CDS
T03428
Name
(GenBank) RHS repeat-associated core domain protein
Organism
but
Burkholderia pseudomallei TSV202
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TcdB_toxin_midN
RHS_repeat
FG-GAP_3
SpvB
FG-GAP
DUF6443
TcdB_toxin_midC
Motif
Other DBs
NCBI-ProteinID:
AIV77564
LinkDB
All DBs
Position
1:2488857..2494952
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AA seq
2031 aa
AA seq
DB search
MAKTSGTADEILNLPSGGGSVSGDGGDFSVDLNTGTATLKFDLTVPAGPNGITPPHTLQY
SAGAGDGAFGIGWSLGLMTIRRRITPATGAAEPAPPGACSLVGVGELVDMGARRFRPIVD
ATGLLIEFTGASWTATDKTDTQYTLGTSANARIGGGALPAAWLVDRCADSAGNAIAYTWL
DVGGARVPQAIAWGTYRLDFVYEARPDVLVDGSYGAPVTLDKRCARIELHATTEAPSLVR
SWTLLYDDGGGRGRSLLATIREQGHAADGSILAAPERTFAYSSPGAPALVPVTGWTTPLS
DPNTDLVDLNGDGLPDIVHLGHGMPTMHPNLGGGQFGAPRPLARTAAPLRLSAPSVAFAD
MSGNGSVDVLVLDAPFSGYYPLAAPGGSAPAGFGRPIVFERAPAVSPSDVRLRFVDLNGD
GITDILLDTGRGWLAYLRDGPASWSDAPRVLPPARTPPVSLADPHVHLADMTGDGLMDIV
RVTGGGLTYWPARADGGWDAAIAMTPSPAFGRDFDPHRLALYDVDGDGCADLVYVGLQSV
TLWRNVGATRLAAPVAIPGTPVALPGSYRIVDLLGSGTAGVHFQLPSIAGASRQSYLDLG
GGVKPYLLTDLAHGAAQSTHIGYRTSTEYARDDAQAGAPWRTYHPFPIQCVARTDQTDHG
TGATTSTRYAYHDARYDPATRTFLGFGRVDSEQLGDASCPTLRVETTFHLGLDPADPARP
LTGDEALKLGALRRKPLVTATYGLDGSPLERRPYSITRHAYDALLVASTADNGKRIAVPY
CTTSTEERWERQSAAVSARTVDYLAITSEGDVTSQRTRAQRAGIAAPDQDVTTTTTLATG
GKNLRLPARVTQTAPGGDIVSESICFYDGDAFAGLPEGQATRGLVTRIEDRVFDDAFVAS
VWGDTPPDLTQYGYHRLPGEAGSWWKTRRAHARGANASGPTLATKGPLGALQTLQYDASG
QRVVKVIDALGNAVAATTDARVFQTASLTDANGHRTADAFDALGRVVATIGPLDTPALPT
IAFTYTVGAISTVTSATRGTHGGADAVPALTWIDGTGNVLGKGTPAAAPGEWTVTHAVRR
NARGLVAASFLPYAATGANWQPPPADTGATTSTYDALGRLVQLTRPDGLVVTSRREGDTL
ITSETWPGGAALDVERQVYDAAGQLVSVSRNAGDHWVEQRYAYAPSGKVRDVTLPGGAHV
AFTLDLLGRVFAQQSPDTGRTVFLLDASDNQRARTNAAGQIVRTDVDAMNRATNVYHDAE
PAPRVRYEYADASGAPPADGIVANRYTRLWRITDEIGTVDFEYDEAGRKTATTRTVAATG
QRFVTRRAYDALGRLARATLPASAPGGAARTIAYGYAADGRLVSASGVVKDAAYDRFGRL
TSIDYENGASTLIDYAANAGGIARVRVLDAARNVLRDTTLTRGGGLVQTLTSAHAGDDSV
DFGYDPLRRLTSAHYRQGATAADAHDWTFDDAFNATAATDAGVLTYEPGTHRLASVGGAA
VAFDAAGRMTSGRFGAATFDAADHLSAVTLPDATHIAHTYDYQGRRVRSTKNGAQTYFSP
IEDIEFQGDTAIVWITFGRQRIAADIGGALTFVHPNALGVMDLITDSGGAYGTRVRQTPF
GYARAADGAALAGGVAAVALALGAADATGLVCHGLRWYDPRVGQFISPDPVVTSVYTVGA
WNPYVYCLGNPILLADPNGCSFLSVLEIIGVAILAAACVVGAIFTGGATLVALGVLSANI
GGWLLAGVALGSLGGAIAGELAAQKAGGNLWAGAFLGAFLGGATSLIGGALGGAAAAGID
TLIGGTKTFLSFVAAGAIQGTLAGAGTGLAIGYAGGKGNAESMLIAMAKGAAWGAVLGTL
LGAGIGAIAGTGISGAAKPDNFLNIGAFGQKFADFTSTSTAINSADNAAGVTESLAQLSM
PNGFNAGNLLGLLPNLVTTNEQAAGWFSIPIGWLGPGVLNDAGFAGLVDTSMALDQAGFS
YAHQISLLLGAAPYFIDYAATMAQIVDANGVNNFEMAFNNAFGSGSPSNTG
NT seq
6096 nt
NT seq
+upstream
nt +downstream
nt
gtggccaagacaagcggtaccgccgacgagatcctgaacctgccttcgggcggcggatcg
gtcagcggcgatggcggcgatttcagcgtcgatctgaacacgggcaccgcgacgctgaag
ttcgatctgacggtgccggccggcccgaacggcatcacgccgccgcacacgctgcagtat
tcggcgggcgcgggcgacggagcgttcggcatcggctggtcgctcgggctgatgacgatc
cgccgcaggatcacgccggcaacgggcgcggccgagcccgcgccgcccggcgcgtgctcg
ctcgtcggcgtcggcgagctcgtcgacatgggcgcgcggcgctttcggccgatcgtcgac
gcgacggggctgctgatcgagttcacgggcgcgtcgtggacggccaccgacaagaccgat
acgcagtacacgctcggcacgagcgcgaacgcacggatcggcggcggcgcgctgcccgcc
gcatggctcgtcgatcgctgcgccgacagcgcgggcaacgcgatcgcgtacacgtggctc
gacgtcggcggcgcgcgcgtgccgcaggcgatcgcatggggcacgtatcggctcgacttc
gtgtacgaggcgcggcccgacgtgctcgtcgacggcagctacggcgcgcccgtcacgctc
gacaagcgctgcgcccgcatcgagctgcacgcgacgaccgaggcgcccagcctcgtgcgc
agctggacgctgctgtacgacgacggcggcggccgcggccgctcgctgctcgcgacgatc
cgcgagcaaggccacgcggccgacggctcgatcctcgccgcgcccgagcgcacgttcgcg
tactcgtcgcccggcgcgcccgcgctcgtgccggtgacgggctggacgacgccgctgtcg
gacccgaacaccgatctcgtcgacctgaacggcgacgggctgcccgacatcgtgcacctt
ggccatggcatgccgacgatgcatccgaacctcggcggcggacagttcggcgcgccgcgc
ccgctcgcgcgcaccgccgccccgctgcggctgtccgcgccctcggtcgcgttcgcggac
atgtcgggcaacggcagcgtcgacgtgctcgtgctcgacgcgccgttctccggctactac
ccgctggccgcgccgggcggctcggcgcccgcgggcttcggccggccgatcgtgttcgag
cgcgcgcccgccgtctcgccgagcgacgtgcggctgcgcttcgtcgatctgaacggcgac
ggcatcaccgacatcctgctcgataccggccgcggctggctcgcgtatctgcgcgacggc
ccggcgagctggtccgacgcgccgcgcgtgctgccgcccgcgcgcacgccgcccgtgtcg
ctcgccgatccgcacgtgcatctcgccgacatgacgggcgacgggctgatggacatcgtg
cgcgtgacgggcggcgggctcacgtactggcccgcgcgcgcggacggcggctgggacgcg
gcgatcgcgatgacgccttcgcccgcgttcgggcgcgatttcgatccgcaccggctcgcg
ctgtacgacgtcgacggcgacggctgcgcggatctcgtctacgtcggcctgcaatccgtc
acgctgtggcgcaacgtcggcgcgacgcggctcgccgcgcccgtggcgattcccggcacg
ccggtcgcgctgccgggcagctaccggatcgtcgatctgctcggctcgggcacggcgggc
gtgcatttccaactgccgtcgatcgcgggcgcgtcgcgccagagctatctcgatctcggc
ggcggcgtgaagccgtatctgctgaccgatctcgcgcacggtgcggcgcaaagcacgcat
atcggctaccgcacgagcaccgagtacgcgcgcgacgacgcgcaagccggcgcgccgtgg
cgaacctatcatccgtttccgatccagtgcgtcgcgcgcaccgaccagaccgaccacggc
accggcgcgacgacgtcgacccgctacgcgtatcacgacgcgcgctacgatcccgcgacg
cgcacgttcctcggcttcggccgcgtcgacagcgagcaactgggcgacgcatcatgcccg
acgctgcgcgtcgagacgaccttccacctcgggctcgatccggccgacccggcccgcccg
ctgacgggcgacgaagcgctgaagctcggcgcgctgcgccgcaagccgctcgtcaccgcg
acgtacgggctcgacggctcgccgctcgagcgccgcccgtattcgatcacgcggcacgcg
tacgacgcgctgctcgtcgcgtcgacggcggataacggtaagcggatcgcggtgccgtac
tgcacgacgtcgaccgaggagcgctgggaacggcagagcgccgccgtatcggcacgcacc
gtcgactatctcgcgatcacgagcgaaggcgacgtcacgtcgcaacgcacgcgcgcgcag
cgcgccggcatcgccgcgcccgaccaggacgtgacgacgacgacgacgctcgccacgggc
ggcaagaacctgagactgccggcacgcgtcacgcagaccgcgcccggcggggacatcgtg
tccgaatcgatctgcttctacgatggcgacgcgttcgccggcttgcccgaaggccaggcg
acgcgcgggctcgtcacccgcatcgaagatcgcgtgttcgacgacgcgttcgtcgcgtcg
gtctggggcgacaccccgcccgacctcacgcagtacggctaccaccggctgccgggcgaa
gcgggcagttggtggaagacccggcgcgcgcacgcgcgcggcgcgaacgcgagcgggccg
acgctcgcgacgaaaggcccgctcggcgcgctgcagacgctgcaatacgacgcgagcggc
cagcgcgtcgtcaaggtgatcgacgcgctcggcaacgcggtggcggccaccaccgatgcg
cgcgtgttccagaccgcctcgctcaccgacgcgaacggccaccggacggccgacgcgttc
gacgcgctcggccgcgtcgtcgcgacgatcggcccgctcgacacgcccgcgctgccgacg
atcgcgttcacgtacacggtgggcgcgatctcgaccgtcacgagcgcgacgcgcggcacg
cacggcggcgcggacgcggtgccggcgctcacgtggatcgacggcaccggcaacgtgctc
ggtaagggcacgcccgccgccgcgcccggcgagtggaccgtcacccacgcggtgcggcgc
aacgcgcgcggcctcgtcgccgcctcgttcctgccgtacgcggcgacgggcgcaaactgg
cagccgccgcccgcggacaccggcgcgacgacgtcgacctacgacgcgctcggccggctc
gtgcagctcacgcggccggacgggctcgtcgtcacgagccgccgcgaaggcgacacgctg
atcacgagcgaaacctggccgggcggcgccgcgctcgacgtcgagcggcaggtgtacgac
gcggcgggccagctcgtatcggtctcgcgcaacgcgggcgatcactgggtcgagcagcgc
tacgcgtacgcaccgtcgggcaaggtccgcgacgtgacgctgccgggcggcgcgcacgtc
gcgttcacgctcgacctgctcggccgcgtgttcgcgcagcaaagccccgacacgggccgc
accgtgttcctcctcgacgcatcggacaaccagcgcgcgcgcacgaacgcggcgggccag
atcgtgcgcaccgacgtcgacgcgatgaaccgcgcgacgaacgtgtatcacgacgcggag
ccggcgccgcgcgtgcgctacgagtacgccgacgcgagcggcgcgccgccggcggacggc
atcgtcgcgaatcgctacacgcgcctctggcggatcaccgacgagatcggcacggtcgac
ttcgaatacgacgaagccggccgcaagaccgcgacgacgcgcaccgtcgcggccaccggg
cagcgcttcgtcacgcggcgcgcatacgacgcgctcggccgcctcgcgcgcgcgacgctg
cccgcgagcgcgccgggcggcgccgcacgcacgatcgcctacggctatgcggccgacggg
cggctcgtcagcgcatcgggcgtcgtgaaggacgcggcctatgatcggttcggacgcctg
acctcgatcgactacgagaacggcgcgtcgacgctgatcgactacgcggcgaacgccggc
ggcatcgcacgcgtgcgcgtgctcgacgccgcgcgcaacgtgctgcgcgacacgacgctc
acgcgcggcggcggcctcgtgcagacgctcacgagcgcgcacgccggcgacgacagcgtc
gacttcggctacgacccgctgcgccgcctgacgagcgcgcactaccggcaaggcgcgacg
gccgccgatgcacacgactggaccttcgacgacgcattcaacgcgacggccgccaccgat
gcgggcgtgctgacgtacgagccgggcacgcaccggctcgcgtcggttggcggcgcggcg
gtggcgttcgatgccgccggccggatgacgagcgggcgcttcggcgcggcgacgttcgac
gcggccgatcacctgagcgccgtcacgctgccggacgcgacgcacatcgcgcacacgtac
gactaccagggccgccgcgtgcgctcgacgaagaacggcgcgcagacgtatttcagcccg
atcgaagacatcgagttccagggcgacacggcgatcgtatggatcacgttcggcagacag
cggatcgcggccgacatcggcggcgcgctgacgttcgtgcatccgaacgcgctcggcgtg
atggatctcatcaccgattcgggcggcgcatacggcacgcgcgtgcggcagacaccgttc
ggctacgcgcgagcggccgacggcgcggcgctggcgggcggcgtcgcggcggtggcgctc
gcgctgggcgcggcggacgcgacgggcctcgtatgccacggcctgcgatggtacgacccg
cgcgtcggccagttcatcagcccggacccggtggtgacgagcgtctataccgtcggcgcg
tggaacccgtacgtgtactgcctcggcaatccgatcctgctcgccgatccgaacggctgc
agcttcctgagcgtgctcgagatcatcggcgtcgcgatcctcgcggcggcctgcgtcgtc
ggcgcgattttcacgggcggcgcgacgctcgtcgcgctcggcgtgctgtccgcgaacatc
ggcggatggctgctcgcgggcgtggcgctcggcagcctcggcggcgcgatcgcgggcgag
ctcgccgcgcagaaggcgggcggcaacctgtgggcgggcgcgttcctcggcgcattcctc
ggcggcgcgacctcgctgatcggcggcgcgctcggcggcgcggccgcggccggcatcgac
acactgatcggcggcacgaagacgttcctgtcgttcgtcgcggcgggcgcgatccagggc
acgctcgcgggcgcgggcacggggctcgcgatcgggtacgcgggcggcaagggcaatgcc
gaatcgatgctgatcgcgatggccaagggcgccgcatggggcgcggtgctcggcacgctg
ctcggcgcggggatcggcgcgatcgcgggcacgggcatcagcggcgcggcgaagccggac
aacttcctgaacattggtgcgttcggccagaagttcgcggatttcacgagcacatcgacg
gcgatcaactcggccgacaacgcggcgggcgtgaccgaatcgctcgcgcagctttcgatg
ccgaacggtttcaacgcgggcaacctgctcggcctgctgccgaacctcgtgacgacgaac
gaacaggcggccggctggttctcgataccgatcggctggctcgggccgggcgtgctgaac
gacgcggggttcgcggggctcgtcgatacgtcgatggcgctcgaccaggcgggattcagc
tacgcgcaccagatctcgctgctgctcggcgcggcgccctacttcatcgactacgcggcg
acgatggcgcagatcgtcgatgcgaacggcgtgaacaacttcgagatggcgttcaacaac
gcgttcgggtcggggagcccgagcaatacggggtga
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