Burkholderia pseudomallei TSV202: X994_274
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Entry
X994_274 CDS
T03428
Name
(GenBank) viral (Super1) RNA helicase family protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
but
Burkholderia pseudomallei TSV202
Pathway
but03420
Nucleotide excision repair
but03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
but00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
X994_274
03430 Mismatch repair
X994_274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
but03400
]
X994_274
Enzymes [BR:
but01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
X994_274
DNA repair and recombination proteins [BR:
but03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
X994_274
MMR (mismatch excision repair)
Other MMR factors
X994_274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
Viral_helicase1
AAA_19
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AIV79457
LinkDB
All DBs
Position
1:complement(308666..309682)
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AA seq
338 aa
AA seq
DB search
MDKTVIFAVAGSGKTTRIVEETDLRRRLLILTYTDENWLNLRRKIIARHGHLPRNVSVMT
YFTFLHAFCFRPIAGLTIKTQGINFKDKPLPGRFKQTQNGYYIDAGGRLYAGRIAKWLAQ
GDRPDTLLARLERFFDAICVDEVQDFASHDFNLLLSFAKARIAMLMVGDFRQHTYDTSRD
GSTRHSLYDNFDRYLAQFRSAGIAVDTHSLARSRRCSPAVCSFISERLGIPIQTLSTCDA
RVIFVETQMHADELRGRADIVKLFYQQHHTHGCYSQNWGASKGEDHYDEICVVLNKNTLT
HYQKGELGKLPRSTLNKLYVALSRSRGNVYLAPHTFFD
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
ttggataaaacagtgatcttcgccgtggccggctctggcaagacgacgcggatcgtcgag
gaaaccgacctccggcgtcgactcctgatcctgacttacacggacgaaaactggctgaac
ctgcgcaggaagattatcgcccgccacggtcacctgccccggaacgtctcggtgatgacg
tacttcacgttcctgcatgcgttctgcttccgcccgattgcggggctgacgatcaaaacg
cagggcatcaatttcaaggacaagccgttacccggccgattcaagcagacgcagaacggc
tattacatagacgcaggcggccgactctacgccggacggattgcaaaatggctcgcccaa
ggcgatcgcccggataccctgctggcgcgccttgagcgtttcttcgatgccatctgcgtg
gatgaggttcaggactttgccagtcatgatttcaatcttctgcttagtttcgccaaagca
cggatcgccatgctgatggtcggcgacttccggcagcacacctacgatacaagtcgcgac
ggttcgacacgtcacagcctgtacgacaacttcgatcgctatctggcacagttccggagc
gcaggcattgcggtggatacccacagtctcgcccgtagtcggcgatgcagccctgcggta
tgcagtttcatcagcgaaagactcggcatacccatacagaccttatcgacatgcgatgcc
cgcgtcattttcgtcgagactcagatgcatgccgacgaactccggggacgtgccgatatc
gtgaagctgttttatcaacaacatcacacgcatggctgctactcgcagaattggggcgca
tccaagggagaggatcactacgatgaaatctgcgtggtgttgaacaagaacacgctcacg
cattaccagaagggtgaattgggcaaactgccacgctcgaccctcaacaagctctatgtg
gcgctgtcacggtcgcggggcaacgtctaccttgcgccgcatacattcttcgactag
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