Burkholderia pseudomallei TSV202: X994_406
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Entry
X994_406 CDS
T03428
Name
(GenBank) uracil-DNA glycosylase, 4 family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
but
Burkholderia pseudomallei TSV202
Pathway
but03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
but00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
X994_406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
but03400
]
X994_406
Enzymes [BR:
but01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
X994_406
DNA repair and recombination proteins [BR:
but03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
X994_406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIV79472
LinkDB
All DBs
Position
1:465057..466472
Genome browser
AA seq
471 aa
AA seq
DB search
MAWTEAALEELGLAPAWVRRDAARAADVNEAAAHAAGETAVAAVARGAQPASPDAPREPA
RRIARDGGRDGGRDGGRDGGQNGGQNGGQNGASGDAGSASPNDAAHAMARVAGAEASAAA
AVADERAALARQAGDGRGQTRQAAAESGARAAADAPAPAAAPASRTRDATIARGASPDEP
GVAGVVGVVGVADEPSVAGGERRARTSGGGADVPASALDWTDAAEATRPAAAPAPAALTG
GDAGAAASDEDMSWFDLEPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLC
EKRTNTVFGVGDEHADWMLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYI
ANVIKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIASMR
GRVHQYEGVPVIVTYHPAYLLRSLQDKAKAWSDLCLANDTYRSAAPAADPP
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcatggactgaagcggcgctcgaagaactggggctcgcgcccgcgtgggtgcggcgc
gacgcggcgcgcgctgcggacgtgaacgaggcggccgcgcacgcggccggagaaaccgcg
gtcgcggcggttgcgcgaggagcgcagccggcgtcgccggatgcgccgcgcgagccggcg
cgtcggatcgcgcgcgatggtgggcgcgacggcgggcgcgacggcgggcgcgacggcggg
caaaacggcgggcaaaacggcgggcaaaacggcgcgagtggcgacgcgggatcggcgtcg
ccgaacgacgcggcgcatgcgatggcgcgtgtcgcgggcgcggaagcgagcgcagccgcc
gccgtcgccgacgaacgcgcggcgcttgcgcggcaggccggcgacgggcgcggacagacg
cggcaagcggcggccgaatccggcgcgcgggcggcggcggatgcgcccgcgccggccgcg
gcgcccgcatcgcggacgcgggatgcgacgattgcgcgcggggcttcgccggacgagccg
ggcgtggcaggcgtggtgggcgtggtgggcgtggcggacgagccgagcgtggcgggcggc
gaacgccgcgcgcggacgagcggcggcggcgcggacgtgccggcgagcgcgcttgactgg
acggatgcggccgaggcaacgcgtccggcggcggcgcccgcgccggccgcgctcaccggt
ggcgatgccggcgcggcggcgtccgacgaggacatgtcgtggttcgatctcgaaccggtg
cacgagcccgtgctgccggacgttgccgcacggcccgccgccactacgccgtccgtcgcc
gagctcggctgggacgaactgcgcgcgcgcgtcgccgactgcgcgcgctgccgcctctgc
gaaaagcgcacgaacacggtgttcggtgtcggtgacgagcacgccgactggatgctcgtc
ggcgaggcgcccggcgagaacgaggacaagcaaggcgagccgttcgtcggccaggcgggc
aagctgctcgacaacatgctgcgcgcgctggcgctcaagcgcggcgagaacgtctacatc
gcgaacgtgatcaagtgccggccgcccggcaaccgcaatccggagcccgacgaggtcgcg
cgctgcgagccgtatctgcagcggcaggtcgcgctcgtgaagccgaagctgatcgtcgcg
ctcggccgcttcgccgcgcagacgctgctcaagacggacggaagcatcgcttcgatgcgc
gggcgcgtgcatcagtacgaaggcgtgcccgtgatcgtcacgtaccatccggcgtatctg
ctgcgcagcctgcaggacaaggcgaaggcctggtccgatctgtgtttggcgaacgatacc
taccggagtgccgcgcccgccgccgatccgccatga
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