KEGG   Burkholderia pseudomallei TSV202: X994_4835
Entry
X994_4835         CDS       T03428                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
but  Burkholderia pseudomallei TSV202
Pathway
but02020  Two-component system
but02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:but00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    X994_4835 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    X994_4835 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:but03021]
    X994_4835 (rpoN)
Transcription machinery [BR:but03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     X994_4835 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38
Other DBs
NCBI-ProteinID: AIV75119
LinkDB
Position
2:1388866..1390341
AA seq 491 aa
MSATLALQMRQHLALTPRLQQSLRLLQLSSLEFQQELRQALDTNPFLEDVQSPDDDAAEA
VPKPGETPAADANARADDGYAERDEGPFATDASPPAGQDVPLTAELSARGSSRRSDDASD
LEPGDWMTAEPTLHEHLHDALRLCQLTRRDRTLARMIIDALDDDGYLRQALPELAAAADP
LLHPAEQELLVALRLVQSLDQPGIGARTLSECLLLQLDAMPADTPGVECAKEIAAHHLER
LARRETAEMQRRIGCDTHTLRIACALVRRLDPRPGNQYGSTAGNYVVPDVIVRQVRNDWL
VTINPAVMPRARIHRRYAELFAQSSGSNQSPLGQQLQEARWLIRNAQKRFDTIRRVGECI
VERQRDFFRYGEIALKPLVLRDIADELGLHESTISRATGNKYMSTPHGTFEFKHFFPRKL
EAAGKGACSAAVARVLIRDMIAAEQAIDPLSDVALAQRLAGRGIVLARRTVTKYRQAMKI
PPAELRRRAPL
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgtccgccacgctcgcgttgcaaatgcgtcaacacctggcgctcacgccgcgcttgcag
cagtcgctgcgtttgctccagctttcgtcgctcgagtttcaacaggaactgcgtcaggcg
ctcgataccaatccgtttctcgaagacgtgcaatcgcccgacgacgatgctgccgaagcc
gtgccgaagccgggcgagacgcccgccgccgacgcaaacgcgagggcggacgacggctac
gccgagcgcgacgagggcccgttcgcgaccgacgcgtcgccgcccgccggccaggacgtg
ccgctgacggcggagctctcggcgcgcggctcgagccggcgctccgacgacgcgtcggat
ctcgagcccggcgactggatgacggccgagccgacgctgcacgagcatctgcacgacgcg
ctgcgcctttgccagctcacccggcgcgaccgcacgctcgcgcgcatgatcatcgacgcg
ctcgacgacgacggctatctgcgccaggcgctgcccgagctcgcggcggcggccgatccg
ctgctgcatccggccgagcaggaactgctcgtcgcgctgcggctcgtgcagtcgctcgat
cagcccggcatcggcgcgcgcacgctgtccgaatgcctgttgctgcagctcgacgcgatg
cccgcggacacgccgggcgtcgaatgcgcgaaggagatcgccgcgcatcacctcgagcgt
ctcgcacgccgcgagacggccgagatgcagcgccgcatcggctgcgacacgcacacgctg
cgcatcgcatgcgcgctcgtgcgccggctcgatccgcgccccggcaaccagtacggcagc
acggcgggcaactatgtcgtccccgacgtgatcgtgcggcaggtgcgcaacgactggctc
gtcacgatcaaccccgccgtgatgccgcgcgcgcgcatccatcgccgctacgcggagctg
ttcgcgcaatcgagcggctcgaatcagtcgccgctcggccagcaactgcaggaggcgcgc
tggctgatccgcaacgcgcagaagcgtttcgacacgatccgccgcgtcggcgagtgcatc
gtcgagcggcagcgcgactttttccgctacggcgagatcgcgctgaagccgctcgtgctg
cgcgacatcgccgacgagctcggcctgcacgaatcgacgatctcgcgcgcgaccggcaac
aagtacatgtcgacgccgcacggcacgttcgagttcaagcacttcttcccgcgcaagctc
gaggcggcgggcaagggcgcgtgctcggcggccgtcgcgagggtgctgatccgcgacatg
atcgcggccgaacaggcgatcgatccgctgtcggacgtcgcgctcgcgcagcgtctggcg
gggcgcgggatcgtgctcgcgcgccgcaccgtcacgaagtatcggcaggcgatgaagatc
ccgcccgcggaattgcgccgccgcgcgcctctatga

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