Burkholderia pseudomallei TSV202: X994_4841
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Entry
X994_4841 CDS
T03428
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
but
Burkholderia pseudomallei TSV202
Pathway
but03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
but00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
X994_4841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
but03400
]
X994_4841
DNA repair and recombination proteins [BR:
but03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
X994_4841
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF6426
Motif
Other DBs
NCBI-ProteinID:
AIV75696
LinkDB
All DBs
Position
2:1394139..1395254
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AA seq
371 aa
AA seq
DB search
MARMIWKGAISFGLVHVPVQLYPATRTVKPSFRLLDKRSLDPVGYRQINKRTGKAVPRED
IVRGYEYEKERYVILTDEEIRAANPESTQTVDILTFVDDEAVSFLYLDTPYYLVPDRGGE
KVYALLRDALKRSGKIGIALVVMRDRQHLGAVIPVGPLLALDTLRWQDELRPLAEIDAPA
ADAKKAGVSAREFEMAAKLIDDMSGDWSPDDYHDTFRDDILALVDRKVREGRVEEIAQED
TAPARRTADIVDLTELLKRSLGRAKGPRRAPDGGANERGDSGDSGDSGDSGEGGGRGGGE
LARELERSVGGTHGGRGGGRKKAEPHAPPRKRAQAAATKRGKQAKPRDGASRASARTAAK
KPAAARKRRAA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcatgatctggaaaggcgcgatcagcttcgggctcgtgcacgtgccggtgcag
ctgtatccggccacgcgcaccgtgaagccttcgtttcgcctgctcgacaagcgttcgctc
gatccggtcggctatcggcagatcaacaagcgaaccggcaaggccgtgccgcgcgaggac
atcgtgcgcggctacgagtacgagaaggaacgttacgtgatcctgaccgacgaggagatt
cgcgcggcgaatccggaatcgacgcagacggtcgacatcctgacgttcgtcgacgatgag
gcggtgtcgttcctctatctcgacacgccgtactacctcgtgcccgatcgcggcggcgag
aaggtctacgcgctgctgcgcgacgcgctgaagcgctcgggcaagatcggcatcgcgctc
gtcgtgatgcgcgaccggcagcatctgggcgcggtgattccggtcgggccgctgctcgcg
ctcgacacgctgcgctggcaggatgaactgcggccgctcgcggagatcgacgcgcccgcc
gccgacgcgaagaaggcgggcgtgagcgcgcgcgagttcgagatggcggcgaagctgatc
gacgacatgtccggcgactggtcgcccgacgattatcacgacacgttccgcgacgacatc
ctcgcgctcgtcgacaggaaggtgcgcgaagggcgggtcgaggaaattgcgcaggaggac
acggcgccggcgcggcgcaccgcggacatcgtcgatctgaccgagctgctcaagcgcagc
ctcggccgcgcgaaggggccgaggcgcgcaccggacggcggcgcgaacgaacgcggcgac
agcggcgatagcggcgacagcggcgacagcggcgaaggcggcggacgaggcggcggcgaa
ctcgcgcgcgagctcgagcgaagcgtcggcggaacgcacggcgggcgtggcggcggccgc
aagaaggccgagccgcatgcgccgccgcgcaagcgcgcgcaggcggccgcgacgaagcgg
gggaaacaggcgaagccgcgcgacggcgcgtcgcgcgcgtcggcgcgcacggccgcgaag
aagcccgccgccgcgcgcaagcggcgcgccgcctga
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