Burkholderia mayonis: WS70_02890
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Entry
WS70_02890 CDS
T06044
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
buu
Burkholderia mayonis
Brite
KEGG Orthology (KO) [BR:
buu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
buu03016
]
WS70_02890
Enzymes [BR:
buu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
WS70_02890
Transfer RNA biogenesis [BR:
buu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
WS70_02890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AOJ00899
UniProt:
A0A1B4FB62
LinkDB
All DBs
Position
1:624188..626266
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AA seq
692 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFEKPAASELMQQADEA
AQQIDLDFLWECAPAEEFAYAALADEYFGASYGPVERAALVLRLHGSPVYFRRKGRGQYQ
RAPEEQLKMALAALERKRQQALVQAGYEDELKAGKLPDVFAGKALNLLTKPDKNSIEYKA
LDAAALARGVSPARLMLDCGGIPSARALHEARFLAEYFPHGTGFPSITVGKLPDDLPRAD
VGAFSIDDITTTEIDDAFSVEHLTDGRVRIGVHIAAPALGVARGDAVDAVARARLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVKRDTQEIVANETRAEYVYVKSNLRHNT
LDELVTEDALAAGTGDYPHKDDIAVLWPLAQALFEKRQVARAGYGLRREVQRNTDYNFYV
EGEHVTITPRRRGSPLDLIVSELAILANSTWGAFLHDHSVPGIYRTQRAFGMPSGPKRTR
MQTSAAPHEGLGVPQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKQKDADLYA
VVQGFDDTYAAYADHQRRMEYFWCLRWIKQEGRKQVSATVVKGELVRLDEVPLLLHVPAL
GVHARGTRVLLDVMSVDELTIEASVRLLSVLDAPTVSGGEPAEDEEEAEAADDVPLDAAD
ESAESEAEALAEAGGAAGGEGDASANGEEQPK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcgtttcaggtcgaattgccgggcggccggcgcgcgaaggtgcgcgcgaaggat
gtgctgatcgaattcgagaaacccgccgcgagcgagttgatgcagcaggcggacgaggcc
gcgcagcagatcgatctggattttctgtgggaatgcgcgcccgccgaggaattcgcgtac
gcggcgctcgccgacgagtatttcggcgcgagctatggcccggtcgagcgcgcggcgctc
gtgctgcgcctgcacggctcgcccgtctatttccgccgcaaggggcgcggccagtatcag
cgcgcgcccgaagagcaactgaagatggcgctcgccgcgctggagcgcaagcgtcagcag
gcgctcgtgcaggccggctacgaagacgagctgaaggcgggcaagctgcccgacgtgttc
gccggcaaggcgctcaaccttctgacgaagccggacaagaattcgatcgaatacaaggcg
ctcgacgcggcggcgctcgcacgcggcgtgtcgcccgcgcggctgatgctcgactgcggc
ggcattccgtctgcgcgcgcgttgcacgaagcgcgctttctcgccgagtacttcccgcac
ggcacgggctttccgtccatcacggtcggcaagctgcccgacgacttgccgcgcgcggac
gtcggtgcgttttcgatcgacgacatcacgacgaccgagatcgacgatgcattctcggtc
gagcatctgaccgacgggcgcgtgcggatcggcgtgcacatcgcggcgcccgcgctcggc
gtcgcgcgcggcgacgcggtcgacgcggtcgcgcgtgcgcggctgtcgaccgtctacatg
ccgggcgacaagatcacgatgctgccggacgacgtcgtcgacgtattcacgctgaaggag
ggcgactaccgcccggcgctgtcgctgtacatcatcgtgaagcgcgacacgcaggagatc
gtcgcgaacgagacgcgcgccgaatacgtctatgtgaagagcaacctgcgccacaacacg
ctcgacgagctcgtcaccgaggatgcgctcgcggccggcacgggcgactatccgcacaag
gacgacatcgcggtgctctggccgctcgcgcaggcgctcttcgagaagcgccaggtcgcg
cgcgcgggctacgggctcaggcgcgaagtgcagcgcaataccgattacaacttctacgtc
gaaggcgagcacgtgacgatcacgcctcgccggcgcggttcgccgctcgatctgatcgtg
tccgaactcgcgatcctcgcgaactcgacgtggggcgcgttcctgcatgaccatagcgtg
ccgggcatctatcgcacgcagcgcgcgttcggcatgccgagcgggccgaagcgcacgcgg
atgcagacgagcgccgcgccgcacgaagggctcggcgtgccgcagtatgcgtggagcacg
tcgccgctgcgccgctacgtcgacctcgtcaatcaatggcaactgctcgcgtgcgtgcag
cacggcgtgaccgcgaagctcgccgcgccgttcaagcagaaggacgcggatctgtacgcg
gtcgtgcagggcttcgacgatacgtacgccgcatacgccgatcatcagcgccggatggag
tatttctggtgcctgcgctggatcaagcaggaaggccgcaagcaggtgagcgcgactgtc
gtgaagggcgagctcgtgcgtctcgacgaagtgcccctgctgctgcacgtgcccgcgctc
ggcgtgcacgcgcgcggcacgcgcgtgctgctcgacgtgatgtcggtcgacgaactgacg
atcgaggcgtcggtgcggctcttgagcgtgctcgacgcgccgacggtgtcgggcggcgag
ccggccgaggacgaagaggaggccgaagcggccgacgacgtgccgctcgacgccgccgac
gagtcggccgaaagcgaagcggaagcgctcgccgaggcgggcggcgcggcgggcggcgag
ggcgacgcgtccgcgaacggcgaggagcagccgaaatga
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