Burkholderia mayonis: WS70_09315
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Entry
WS70_09315 CDS
T06044
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
buu
Burkholderia mayonis
Pathway
buu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
buu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WS70_09315 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
buu03021
]
WS70_09315 (rho)
03019 Messenger RNA biogenesis [BR:
buu03019
]
WS70_09315 (rho)
Transcription machinery [BR:
buu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
WS70_09315 (rho)
Messenger RNA biogenesis [BR:
buu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WS70_09315 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOJ02001
UniProt:
A0A1B4FEB3
LinkDB
All DBs
Position
1:2071763..2073025
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AA seq
420 aa
AA seq
DB search
MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKSNAEFFDLMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgagctcaagtctctgcacgtctccgaattgatcgaaatggccaatggc
ctggagatcgaaaacgcgaaccgcctgcgaaagcaggagttgatgttcgccattctcaaa
aagcgcgccaagacgggagaaacgatcttcggcgacggcacgctcgaagtgctgccggat
ggtttcggcttcctgcgctcgccggaaatgtcgtacctcgcgagcaccgacgacatctac
atcagcccgtcgcagatccgccgcttcaacctgcacaccggcgacacgatcgaaggcgaa
gtccgcacgccgaaggacggcgagcgctatttcgcgctcgtgaaggtcgacaaagtcaac
gggcagccgcccgaggcctcgaaacacaagatcatgttcgagaacctcacgccgctccac
ccgaacaagccgctgtcgctcgagcgcgaaatgcgcggcgaggaaaacgtgacgggccgc
atcatcgacatgatcgcgccgatcggcaagggccagcgcggcttgctcgtcgcgtcgcca
aagtccggcaagaccgtgatgcttcaacacatcgcgcatgcgatcaagcagaaccatccg
gacgtgatcctgttcgtgctcctcatcgacgagcgccccgaagaagtgaccgaaatgcag
cgctcggtcgcgggcgaagtgatcgcgtcgacgttcgacgaaccggccacgcgtcacgtg
caggtcgccgaaatggtgatcgagaaagccaagcgcctcgtcgaaatgaagcacgacgtc
gtgatcctgctcgactcgatcacgcgtctcgcacgcgcgtacaacaccgtgatcccggcg
tcgggcaaggtgctgacgggcggcgttgacgcgaacgcgctgcagcgccccaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggctcgctcacgatcatcggcaccgcgctg
atcgaaaccggcagccgtatggacgacgtgatctacgaagagttcaagggcacgggcaac
atggaagtgcacctcgagcgccgcctcgcggaaaagcgcgtctatccgtcgatcaacctg
aacaagtccggcacgcgtcgcgaagaaatgctgatcaagcccgagatcctccaaaaaatc
tgggtgctgcgcaagttcatccacgacatggacgaagtcgaagcgatggaattcctgctc
gacaagatccgccagacgaagagcaacgcagaattcttcgatctgatgcgccgcggcggc
tga
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