Burkholderia mayonis: WS70_14285
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Entry
WS70_14285 CDS
T06044
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
buu
Burkholderia mayonis
Pathway
buu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
buu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WS70_14285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
buu03019
]
WS70_14285
Enzymes [BR:
buu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WS70_14285
Messenger RNA biogenesis [BR:
buu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WS70_14285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
Ric8
CMS1
DegT_DnrJ_EryC1
Sacchrp_dh_NADP
AAA_22
Cas3-like_C_2
CARD_2
Motif
Other DBs
NCBI-ProteinID:
AOJ02848
UniProt:
A0A1B4FGL1
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All DBs
Position
1:3217038..3218513
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AA seq
491 aa
AA seq
DB search
MSFASLGLAEPLVRAVTELGYTQPTPIQAQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLHTFYAENRSARRAVRALILTPTRELAAQVEESVRAYSKYVKLRSTVMFGGVSINPQI
DALKRGVDIVVATPGRLLDHMQQKTIDVSSLDILVLDEADRMLDMGFIHDIKRVLAKLPE
KRQNLLFSATFSDEIKSLADSLLDSPALIEVARRNTTAETVAQKIHPVDRDRKRELLTHL
IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALAEFKSSTLQVL
VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGANGEAVSLVCVDEKQLLRD
IERLIKREISQEVISGFEPDPNTKPEPIQRRAQRGGNSGGNGGGASNGGRNGGGNRAPRA
ANQGQAPGQPAARRDGGAKAKAAPSKAVQPKTAKPQQARGGSGRPTGNGNANGGGAHANR
NRSSRSGQRGH
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgcatctctcggcctcgccgaaccactcgtgcgggccgtcaccgagctgggc
tacacgcagcccacgccgatccaggcccaggccatccccgctgtgctgggcggcggcgat
cttctcgccggcgcgcagacgggcaccggcaagacggcaggcttcacgctgccgatcctg
caacgcctgcacacgttctatgcggaaaaccgcagcgcgcggcgcgcggtgcgcgccctc
atcctcacgccgacgcgcgagctcgccgcgcaggtcgaggaaagcgtgcgcgcatacagc
aagtacgtgaagctgcgctcgaccgtgatgttcggcggcgtcagcatcaatccgcagatc
gatgcgctgaagcgcggcgtcgacatcgtcgtcgcgacgccggggcgcctgctcgatcac
atgcaacaaaagacgatcgacgtgtcgagcctcgacatcctcgtgctcgacgaagccgac
cggatgctcgacatgggcttcatccacgacatcaagcgcgtgctcgcgaagctgccggag
aaacgccagaacctcctgttctcggcgaccttctccgacgagatcaagtcgctcgcggac
agcctgctcgactcgcccgcgctgatcgaagtcgcacgccgcaacacgacggccgagacg
gtcgcgcagaaaatccacccggtcgaccgcgaccgcaagcgcgagctgctcacgcatctg
atccgcgagcacaactggttccaggtgctcgtgttcacgcgcacgaagcacggtgcgaac
cggctcgccgagcagttgacgaaggacggcatcagcgcgatggcgatccacggcaacaag
agccagtcggcgcgcacacgcgccctcgccgagttcaagagcagcacgctgcaggtgctc
gtcgcgaccgacatcgccgcacgcgggatcgacatcgatcaattgccgcacgtcgtcaac
ttcgatctgccgaacgtgcccgaagactacgtgcaccggatcggccgcacgggccgcgcg
ggcgcgaacggcgaggcggtgtcgctcgtgtgcgtcgacgagaagcaattgctgcgcgac
atcgagcggctcatcaagcgcgagatctcgcaggaagtgatttcgggcttcgagccggac
ccgaacacgaagccggagccgatccaacggcgcgcgcagcgcggcgggaatagcggcgga
aacggcggcggcgcgagcaacggcggccgcaacggcggcggcaatcgcgcgccgcgggcc
gcgaatcaagggcaagcgccgggccaacccgccgcgcgtcgcgacggcggcgcaaaagcg
aaggctgcgccatcgaaggcagtgcagcccaaaaccgcgaagccgcagcaagcacgcggc
ggcagcggacgaccgacgggcaacggcaacgcgaacggcggcggcgcgcatgcgaatcgc
aatcgttcgtcgcgcagcggtcagcgcggccattga
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