Burkholderia sp. MS455: FPJ27_11355
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Entry
FPJ27_11355 CDS
T11444
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
buv Burkholderia sp. MS455
Pathway
buv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
buv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FPJ27_11355
09124 Replication and repair
03420 Nucleotide excision repair
FPJ27_11355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
buv03021
]
FPJ27_11355
03036 Chromosome and associated proteins [BR:
buv03036
]
FPJ27_11355
03400 DNA repair and recombination proteins [BR:
buv03400
]
FPJ27_11355
Enzymes [BR:
buv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
FPJ27_11355
Transcription machinery [BR:
buv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FPJ27_11355
Chromosome and associated proteins [BR:
buv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
FPJ27_11355
DNA repair and recombination proteins [BR:
buv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FPJ27_11355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
GlgS
ResIII
FJX1_middle
HBB
Motif
Other DBs
NCBI-ProteinID:
QRR06965
LinkDB
All DBs
Position
2:1432106..1434406
Genome browser
AA seq
766 aa
AA seq
DB search
MSYVVAVRAMCEFTARRGDLDLRFTPAPTALEGIAGHGAVTSNRGARYETEIALTGTWGT
LTVRGRADGYDPVANRIEEIKTYRGSLDAMPANHRALHWAQAKVYAYLMCDARGLAEIDV
ALVYFDIVSERETVLTETLDAHTLAAFFAEQCACFVGWAERETAHRAARDAALRALAFPH
GQFRSGQRELAVAVYRAARDERCLMAQAPTGIGKTLGTVFPLLKACGEGELDHVFFLTAK
TPGRALALEAATTLGAGTPALPLRVLELVARDKACEHPDKACHGESCPLAQGFYDRLPAA
RDAAIGAGLLDRDTVRAAALAHDVCPYYLAQELARWSDMMIGDYNYYYDGSAMLHTLAQQ
NQWRVGVLVDEAHNLLDRARKMYSASLDPFAFAAAREAAPAALRKAFDRLARAWGTVNRA
QAERYAAYPDIPGPIVSAVQNLVAAIGEHLTDAPRANGDALLRFHFEAIQFGVLAEAFDS
ASIFDATLHGEPMPRQPALDGVASASRRRRVQSTLCVRNVIPAGFLAPRYEAARATVLFS
GTLSPFHFYRDTLGLPGDTGWLDVDGPFRAEQLTVRVASHVSTRWRDRDRSLEPIADLIA
AQYATRPGNYLGFLSSFDYLGRVVALMQTRHPDVPVWAQAPGMAESERDAFLARFDAGGR
GVGFAVLGGAFSEGVDLVGERLIGAFIATLGLPQVNDVNEQMRRAMDARFGNGYDYMYLY
PGLQKVVQAAGRVIRTEHDEGVVHLIDDRYRRREVRDLLPRWWRIG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
gtgagctacgtcgtcgcggtgcgggcaatgtgcgagttcaccgcgcggcgcggcgatctc
gacctgcgcttcacgcctgcgccgaccgcgctcgaaggcatcgccggccacggcgcggtc
acgtcgaaccgcggcgcgcgctacgaaaccgagatcgcgctgacgggcacgtggggcacg
ctcaccgtgcgcggccgcgcggacggctacgatcccgtggcgaaccgcatcgaggaaatc
aagacctatcgcggcagcctcgacgcgatgccggcgaaccaccgcgcactgcactgggcg
caggcgaaggtctatgcgtacctgatgtgcgacgcgcgcggtctcgcggaaatcgacgtc
gcgctcgtgtatttcgacatcgtgtccgagcgcgagaccgtgctgactgaaacgctggac
gcgcacacgctcgcagcgttctttgccgagcagtgcgcatgcttcgtcggctgggccgag
cgcgagacggcccatcgcgcggcgcgcgatgcggcgctgcgcgcgctcgcgtttccgcat
gggcagttccgcagcggccagcgcgagctggcggtcgccgtctatcgcgcggcgcgcgac
gagcgctgcctgatggcgcaggcgccgaccggcatcggcaagacgctcggcaccgtgttc
ccgctgctgaaggcgtgcggcgagggcgagctcgaccatgtgttcttcctcaccgcgaaa
acgcccggacgcgcgctcgcgctcgaagcggcgacgacgctcggcgccggcacgcccgcg
ctgccgctgcgcgtgctggagctcgttgcccgcgacaaggcgtgcgagcatccggacaaa
gcgtgccacggcgaatcgtgtccgctcgcccaaggcttctacgaccggctgccggccgcg
cgcgacgcggcgatcggcgccgggctgctcgatcgcgatacggtgcgcgcggccgcgctc
gcgcacgacgtctgtccgtactacctcgcgcaggagctcgcgcgatggtcggacatgatg
atcggcgactacaactactactacgacggcagcgcgatgctgcacacgctcgcgcagcag
aaccagtggcgcgtcggcgtgctcgtcgacgaagcgcacaacctgttggaccgtgcgcgc
aagatgtacagcgcgtcgctcgatccgttcgcgttcgcggccgcgcgcgaagccgcgccc
gcggcgctgcgcaaggcgttcgaccggctcgcccgcgcatggggcacggtcaatcgcgcg
caggccgaacgctatgcggcgtatccggacattccgggcccgatcgtgtcggccgtgcag
aacctcgtcgcggcgatcggcgagcacctgaccgacgcgccgcgcgcgaacggcgacgcg
ctgctgcgctttcatttcgaggcgatccagttcggcgtactcgccgaagccttcgacagc
gcgtcgatcttcgacgcgacgctgcacggcgagccgatgccgcgccagccggcgctcgac
ggcgtcgcgtcggccagccggcggcgccgcgtccagtcgacgctgtgcgtgcgcaacgtg
atcccggccggatttctcgcgccgcgctacgaagccgcgcgcgcgaccgtgctgttctcg
ggcacgctgagcccgttccatttctaccgcgacacgctcgggcttcccggcgatacgggc
tggctcgacgtcgacgggccgttccgcgccgagcaactgacggtgcgcgtcgcgagccac
gtgtcgacacgctggcgcgaccgcgaccgttcgctcgaaccgatcgccgacctgatcgcc
gcgcaatacgcgacgcggccaggcaactaccttggtttcctgagcagcttcgactacctg
gggcgcgtggtcgcgctgatgcagacgcgccatccggacgtgccggtatgggcgcaggcg
cccggcatggccgaaagcgagcgcgatgcgtttctcgcacgcttcgacgcgggcgggcgc
ggcgtcggcttcgcggtgctgggcggcgcgttctcggaaggcgtggacctggtcggcgaa
cggctgatcggcgcattcatcgcgacgctcgggttgccgcaggtcaacgatgtcaacgag
cagatgcggcgcgcgatggacgcgcgcttcggcaacggctacgactacatgtacctgtat
ccgggcttgcagaaggtcgtgcaggcggccgggcgcgtgatccgcaccgagcacgacgaa
ggcgtcgtgcatctgatcgacgatcgttaccggcggcgggaagtgcgcgatctgttgccg
cggtggtggcggatcgggtga
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integrated database retrieval system
