Burkholderia sp. MS455: FPJ27_25625
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Entry
FPJ27_25625 CDS
T11444
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
buv Burkholderia sp. MS455
Pathway
buv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
buv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FPJ27_25625 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buv03400
]
FPJ27_25625 (recC)
Enzymes [BR:
buv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FPJ27_25625 (recC)
DNA repair and recombination proteins [BR:
buv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FPJ27_25625 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QRR09632
LinkDB
All DBs
Position
3:1217428..1220766
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AA seq
1112 aa
AA seq
DB search
MLHLFYSNRHETLADALLEDLAAFPARNGPWAPQQVIVPSAALRRRLELDIAARNGVCAN
VEFTYLAQWLWAQIGRVLTVPARSPFAPDRLVWRCYRLFAQAADGAPWLASPRLAAYLSA
SDDAMRYELAHRVAAVLDHYLTYRPEWLAAWQAGESVLAGDGAPRGISDAARDDERWQAA
LWRALLAELSDSGTPPAHRFMVEARHLDADAVARADWPESVSVFALPTMPPLHVALLREL
SRWIDVRVYALNPCREFWFDIVTAAHAEALDAAGRLDYQEVGHPLLAEWGRQTQAQLHML
HELTESAAVGDASRFVENPAPTWLARVQNAILELQPEAEAGDAPAERGIEVHVCHSLARQ
LEVLHDRLLAWFDADASLQPSDVLVAVADLAAAGPLIDAVFGTAGAGGARVPYRITGLPP
SQANPVARVLLDWLALPERQVGAPELVEWLRVDAVAARYGIDAAALETVQTWLAAAGARR
GLSPRASDDAAVPAPRHTFSDALARLFLGYAMPEGAAPVGAWLPIEAATGSEAELLGRLA
RFTDDLDGFARRLAESHTPRGWSELFADTLARFFDSGAAYADALAGVRDALDAMLAAMTE
GAPDEALPAAVVRAGLAAALDDPARGGVPWGGVTFSSLTSLRGLPYRVVCLLGMDDGVLP
SLSRADEFDLMAVMPKLGDRQRRDDERNLFLDLLLAARDRLLIAYTGRSIRDNAPLPPAA
LVDELLDHLALVTAGPDAAPDAVDAARRAFIVEHPLQPFAAAYFQPGSGLVSYDAERATL
ASLLAADASRDGSRELPFFAQPLPAEPVEPVAFSEFERFWRHPARALLRARLGIVLADAQ
AELLDTEPFALDFAGSDALAERVLPLLIESDDGAAHDHALRIADASPELPGGATGAVWRD
QALGSMTQLASNVRRALADGIERRPFSLVIVPAWPDTEQALFGADDAMLSGDAVSAPLEL
HGTLNRLTPAGQIIYRYARSSARDYLSAWLAHLVYCAVEPGGPRRTLWFGSGGAFELTPV
AAPLERLAPLAALFRAGRRMPLRFFPRSAWARVSDGEAKAASVWINERVVSEADDPAIAI
AWRGARASLDEPFGTLARLVFEPLVEHLKEVA
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgctccatctcttctattcgaatcgtcacgaaacgctggccgacgcgctgctcgaggat
ctggccgcgtttccggcccgcaacggcccgtgggcgccgcaacaggtcatcgtgccgagc
gcggcgctgcgccgccgcctcgagctcgacatcgccgcgcgcaacggcgtgtgcgcgaac
gtcgagttcacgtatctcgcacaatggctgtgggcgcagatcggccgcgtgctgacggtg
cccgcgcgttcgccgttcgcgcccgaccgtctcgtgtggcgctgctaccggctgttcgcg
caggcggccgacggcgcgccgtggctcgcttcgccgcggctcgccgcgtacctgtccgcc
tccgacgatgcgatgcgctacgagctcgcgcatcgcgtcgcggccgtgctcgatcattac
ctgacctatcgccccgaatggctggcggcgtggcaggccggcgagtcggtgctcgcgggc
gatggcgcgccgcgcgggatcagcgacgccgcacgcgacgacgagcgctggcaggcagcg
ctgtggcgcgcgctgctcgcggaactgagcgacagcggcacgccgcccgcgcaccgcttc
atggtcgaagcgcgccatctcgatgccgacgcggtcgcgcgtgccgactggccggaatcg
gtcagcgtgttcgcactgccgacgatgccgccgctgcacgtcgcgctgctgcgcgagctg
tcgcgctggatcgacgtgcgcgtctacgcgctgaacccgtgccgcgaattctggttcgac
atcgtgaccgccgcgcatgccgaggcgctcgatgcggccggccggctcgactaccaggaa
gtcggccatccgctgctcgccgagtggggccggcagacgcaggcgcaactgcacatgctg
catgagctgactgaaagcgccgcggtgggcgatgcgtcgcgtttcgtcgagaatcccgcg
ccgacgtggctcgcgcgcgtgcagaacgcgatcctcgaactgcagccggaggccgaagcc
ggcgatgcgccggccgaacgcgggatcgaggtgcacgtgtgccacagcctcgcgcgccag
ctcgaggtgctgcacgaccggctgctcgcgtggttcgatgccgacgcgagcctgcagccg
tccgacgtgctcgtcgcggtggccgatctcgcggcagccggaccgctgatcgatgcggta
ttcggcacggccggcgccggcggcgcgcgcgtgccttaccggatcaccggcctgccgccg
tcgcaggcaaacccggtcgcgcgcgtgctgctcgactggctcgcgctgccggagcggcag
gtcggcgcgccggagctggtcgaatggctgcgcgtcgatgcggtggctgcgcgctacggc
atcgatgcggccgcgctcgagacggtgcagacctggctcgcggccgccggcgcgcggcgc
gggctgtcgccgcgtgcgagcgacgacgcggccgtgcctgcgccgcgccatacgttctcc
gacgcactcgcgcggctctttctcggctatgcgatgcccgaaggcgcggcgccggtcggc
gcgtggctgccgatcgaggcggccacgggcagcgaggccgaactgctcggccggctcgcg
cgtttcaccgacgatctcgacggcttcgcgcggcggctcgctgaatcgcacacgccgcgc
ggctggagcgagctgttcgccgacacgctggcgcgcttcttcgattcgggcgccgcgtat
gcggatgcgctcgcgggcgtgcgcgacgcgctcgacgcgatgctggccgcgatgacggag
ggtgcgcccgacgaagcgctgccggcggccgtcgtccgcgcggggcttgcagcggcgctc
gacgatccggcgcgcggcggggtgccgtggggcggcgtcacgttctcgtcgctgacgagc
ctgcgcggcctgccgtaccgcgtcgtctgcctgctcgggatggacgacggcgtgctgccg
agcctctcgcgcgcggacgagttcgacctgatggccgtgatgccgaagctcggcgaccga
cagcgccgcgacgacgagcgcaacctgtttctcgacctgctgctcgccgcacgcgatcgg
ctgctgatcgcgtacacgggccgcagcattcgcgacaacgcgccgttgccgcccgcggca
ctcgtcgacgaactgctcgaccatctcgcgctcgtcacggccgggcccgacgcggcgccg
gacgccgtcgatgccgcgcggcgcgcgttcatcgtcgagcatccgctgcaaccgttcgcg
gccgcgtatttccagcccggcagcgggctcgtttcctatgacgccgagcgcgcgacgctt
gcgtcgctgctggccgccgacgcgtcgcgcgacggctcgcgcgaactgccgttcttcgcg
cagccgctgccggcggaaccggtcgagcccgtcgcgttcagcgaattcgaacgcttctgg
cggcatcccgcgcgggcgctgttgcgcgcacgtctcggcatcgtgctcgccgatgcgcag
gccgaattgctcgacacggagccgttcgcgctcgacttcgccggcagcgatgcgctcgcc
gagcgtgtactgccgctcctgatcgaatcggatgatggggccgcgcacgatcatgcgttg
cgcattgcggacgcgagccccgagttgccgggcggcgcgacgggcgccgtgtggcgcgac
caggcgctcggctcgatgactcagcttgcgtcgaacgtgcgccgtgcgctggccgacggc
atcgagaggcggccgttttcgctcgtcatcgtgcccgcgtggcccgatacggaacaggcg
ctgttcggcgccgacgacgcgatgctgtcgggcgacgcggtcagcgcaccgctcgaactg
cacggcacgctgaaccggctgacgccggccgggcagatcatctaccgctatgcacggtcg
agcgcgcgcgactacctgtccgcgtggctcgcgcatctcgtctactgcgcggtcgaaccg
ggcggcccgcgccgcacgctgtggttcggcagcggcggtgcgttcgagctgacgcccgtc
gcggcgccgctcgaacggctcgcgccgcttgccgcgctgtttcgcgcagggcggcgcatg
ccgctgcggtttttcccgcgcagtgcgtgggccagggtgtccgacggcgaagccaaggcc
gcgagcgtctggatcaacgagcgtgtcgtgagcgaggccgacgatccggccatcgcgatc
gcgtggcgcggcgcgcgcgcgtcgctcgacgagccgttcggcacgctcgcgcggctcgtg
ttcgagccgctcgtcgaacatctgaaggaggtcgcatga
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