Burkholderia sp. MS455: FPJ27_29360
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Entry
FPJ27_29360 CDS
T11444
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
buv Burkholderia sp. MS455
Pathway
buv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
buv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPJ27_29360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
buv03021
]
FPJ27_29360
03019 Messenger RNA biogenesis [BR:
buv03019
]
FPJ27_29360
Transcription machinery [BR:
buv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FPJ27_29360
Messenger RNA biogenesis [BR:
buv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FPJ27_29360
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_25
ATPase_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QRR10297
LinkDB
All DBs
Position
3:2041713..2042975
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AA seq
420 aa
AA seq
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MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKPLALEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVVLFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKSNSEFFDLMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgagctcaagtctctgcacgtgtccgaactgatcgaaatggccaatggc
ctcgagatcgaaaacgcgaaccgcctgcgcaagcaggagttgatgttcgccattcttaaa
aagcgcgccaagacgggagagacgatcttcggcgacggtacgctcgaagtgctgccggac
ggcttcggcttcctgcgctcgccggaaatgtcgtacctcgcgagcaccgacgacatctat
atcagcccgtcgcagatccgccgcttcaacctgcacaccggcgacaccatcgaaggtgaa
gtccgcacgccgaaggacggcgagcgctacttcgcgctggtgaaggtcgacaaagtcaac
gggcagccgcccgaggcctcgaaacacaagatcatgttcgagaacctcacgccgctgcac
ccgaacaagccgctggcgctcgaacgcgagatgcgcggcgaagagaacgtcacgggccgc
atcatcgacatgatcgcgccgatcggcaagggccagcgcggcctgctggtcgcgtcgccg
aagtcgggcaagaccgtgatgctccagcacatcgcacacgcgatcaagcagaaccacccg
gacgtcgtcctgttcgtgctgctgatcgacgagcgccccgaagaagtgaccgaaatgcag
cgctcggtcgccggcgaagtcatcgcgtcgacgttcgacgaaccggccacgcgtcacgtg
caggtcgccgaaatggtgatcgagaaggccaagcgcctcgtcgaaatgaagcacgacgtc
gtgattctgctcgactcgatcacgcgtctcgcacgcgcatacaacaccgtgatcccggca
tcgggcaaggtgctgacgggcggcgtcgacgcgaatgcactgcagcgtccgaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggctcgctgacgatcatcggcaccgcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagagttcaagggcaccggcaac
atggaagtgcacctcgagcgccgcctcgcggaaaagcgcgtctatccgtcgatcaacctg
aacaagtcgggcacgcgtcgcgaggaaatgctgatcaagcccgagatccttcaaaagatc
tgggtgctgcgcaagttcatccacgacatggacgaagtcgaggcaatggaattcctgctc
gacaagattcgccagacgaagagcaactccgagttcttcgacctgatgcgtcgcggcggc
tga
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